Raphanus sativus (radish): 108844513
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Entry
108844513 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: 4-substituted benzoates-glutamate ligase GH3.12
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108844513
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108844513
NCBI-ProteinID:
XP_018473279
UniProt:
A0A6J0MMC8
A0A9W3CYE6
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Position
3:complement(3682088..3684191)
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AA seq
570 aa
AA seq
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MSVSFDLNDLDELTLNAKQIQDNLLEEILTINTNTEYLRQFLHGSSDKELFKKNVPVVMY
EDVKPYIERVANGEPSGVISGKAVTQFLLSSGTSGGKQKIFPVNKKFFEDMAFITAQSSS
IISKHIEGVKQGKTMTFYFARVPSSTPSGLPVSFVRGSYLTSESFKNESSYRYTSPNEVM
LCSDNKQAMHCHLLCGLIQRDEVVSLAAPFACSLVGAITVLENNWKELCSNIRSGHVSEW
ITDFACREVVTNILGGPNSELADRIEEECQKESWKGIITRLWPKTKFIQSVITGQNAQFI
PMLEFYSNKLPLISPIYASSETMFGVNVNPLCKPQDISYTFMPNMSYFEFLRAGDNGNEG
DIVDLVDVQIGCYYEPLVTNYFGLHRYRMGDILQVSGFHNNAPQXRFVRRKSVVLSINVE
VTTEEDILKALNHATDHLIKTSDLILMGFTCYADIASLPGHYVFYWELKAKKVDDIVKLD
NKVMVECCCVMEESLNFLYRKVRTNEGSIGPLEIRVVQQGTFDSLMKLFISRGASASQYK
PPICINSSEALELLENSVIARFFSDKFPPP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgagttttgatctcaacgatctggatgagctgacattaaatgccaagcaaata
caagacaatctattagaggagatactcacgattaataccaacacagagtacctccgacag
tttctccatggaagctctgataaagagctattcaagaagaatgtaccagttgtgatgtat
gaagatgttaagccttatatcgaacgtgtcgcgaatggggagccttcaggtgtcatttcc
ggaaaagctgtcactcaatttctcttgagctctgggacttctggaggaaaacaaaagatc
ttccctgttaataagaagttttttgaggacatggcattcatcactgctcaatcttcgtcc
ataatatccaagcatatcgagggtgtcaaacaaggaaagacgatgacgttttatttcgct
agagtgccatcttcaaccccctctggcttgccagtttctttcgtgaggggaagctattta
acgagtgaatctttcaagaacgagtcatcatatcgctatacaagtcctaatgaagtgatg
ttgtgctcagacaataaacaggctatgcactgccatcttctttgtggtcttattcagaga
gacgaagttgtgagtctggctgctccctttgcctgtagtttagttggagcaatcactgtt
ctcgaaaataactggaaagaattgtgtagtaacattcgatctggccatgttagcgagtgg
atcactgattttgcttgcagagaagttgtgactaacatcttgggaggacctaattccgaa
ttagcagatagaattgaagaagaatgccagaaagaatcttggaaaggtataatcacacgt
ctttggcccaaaacgaaattcattcaaagtgttattacaggacaaaacgcacaattcatt
ccaatgttggagttttactccaacaaactgcctttgatatcccccatttacgcgtcttct
gagacaatgtttggagtaaatgtgaatcccttatgcaagccacaagatatatcctacact
tttatgcctaatatgtcttactttgagttcctacgcgctggcgacaacggtaacgagggt
gacattgttgatcttgtggatgttcagattgggtgctactatgagcccttggtcacaaat
tatttcggtttacacagatatagaatgggggatattctacaagtgtctggattccacaat
aatgcacctcaanttagatttgtacgcagaaaaagtgtggttctaagcatcaacgtggag
gtaacaactgaagaagacattttgaaggcactgaatcatgcgacagaccaccttattaaa
acttcagatttaatattgatgggattcacatgttatgctgatatcgccagtcttccaggt
cactacgttttctactgggaactcaaagccaaaaaagttgatgacattgttaaactcgat
aacaaggtaatggtggaatgttgttgtgtaatggaggaatcattaaattttctttatcga
aaggtaaggacaaacgaggggtctattggacctctagagataagggtggtgcaacaagga
acttttgattctcttatgaagctgtttatctctcgaggtgcttctgcatctcaatacaag
ccacctatttgcatcaactcttctgaagctttagaacttcttgaaaatagtgttattgct
cgctttttcagtgacaagttcccaccaccgtga
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