Raphanus sativus (radish): 108844659
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Entry
108844659 CDS
T06014
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108844659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108844659
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108844659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_DCAF4
NBCH_WD40
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_VPS8
MIOS_WD40
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
108844659
NCBI-ProteinID:
XP_018473446
UniProt:
A0A6J0MPK5
LinkDB
All DBs
Position
3:25779945..25782446
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AA seq
482 aa
AA seq
DB search
MESPQKTKTGLNLPAGMNQTSLRLETFSSSFRGISTLSSPSKSTCSDRFIPCRSSSRLHA
FDLQDKEPTTATTPVKEGGNEAYSRLLKSELFGSDFVSPLSPAGGGGASSPMSPCTPNML
RFKTDRSNSSPCSPFSPSILGNDNGLSSDSSPPKPPRKVPKTPHKVLDAPSLQDDFYLNV
VDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSLQWTREGSYISVGTSHGQV
QVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKS
EVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASG
GGTADRCIRFWNTTNGHQINSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMA
KVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVRDTGLWSLGRTQ
IR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgccacagaaaacgaaaaccggtttaaacctccccgcgggtatgaaccagacc
tcgttacgtctcgagacgttctcgagctcgttccgcggcatctcgactctctcctccccc
tccaaatcaacctgcagcgacaggttcatcccctgcagatcttcctcgaggctccacgct
ttcgatctgcaggacaaggaaccaacgacggcgacgacgccggtgaaagagggagggaac
gaagcttactccaggcttttgaaatctgagcttttcggatctgatttcgtttctcctttg
tctcctgcaggtggtggtggtgcttcttctccgatgagtccgtgtactcctaacatgctg
agattcaagacggatcgttccaattcgagtccttgctctcccttctctccttccatcctc
ggcaacgacaatggtctctctagtgactcctctcctcctaagcctcctcgcaaggttcct
aaaactcctcataaggtattggatgcaccttctttgcaagatgacttctacttgaacgtt
gtggactggagctcacagaatgttcttgcggttgggcttggtacttgtgtctatctctgg
actgcttctaacagcaaagtgacgaagttatgtgacctgggacctaatgatagcgtgtgc
tcgcttcagtggacacgtgagggttcttatatatctgtcggtacaagtcatggtcaagtt
caggtttgggatggaacacagtgcaagagagtccggactatgggaggtcatcaaacgaga
actggtgtcttggcctggaactcaaggatcttatcatcagggagcagagacagaaacatc
cttcaacacgatatacgagtccagagcgattatgtcagcaaactcgtgggacacaaatct
gaggtctgcggcctgaaatggtctcatgatgatagagagcttgcgtctggaggcaacgat
aatcagttattagtgtggaacaatcattcacaacaacctattctgaagttgactgagcat
acagcagcggttaaggcaattacatggtctcctcatcagagcagcctccttgcttcagga
ggtgggacggcagacaggtgcattagattctggaacacgacgaatggacatcagataaac
agcatcgacactggaagccaggtctgcaatctggcgtggagcaagaatgtcaatgagata
gtgagcactcacgggtactctcagaaccaaatcatgctctggaagtatccatccatggca
aaggttgcaacgcttacagggcacagtatgagagtactttacttggctacatcacctgat
ggccagactatagtgaccggagcaggagatgagaccctgcggttttggaatgtcttccct
tcagtgaaaatgcagacaccggtgagggacacaggcctctggtcattagggaggacacaa
atccgataa
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