Raphanus sativus (radish): 108844712 Help Entry 108844712         CDS       T06014                                  Name (RefSeq) protein SHORTAGE IN CHIASMATA 1   KO K28108   shortage in chiasmata 1 Organism rsz  Raphanus sativus (radish) Brite KEGG Orthology (KO) [BR:rsz00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:rsz03036]     108844712 Chromosome and associated proteins [BR:rsz03036]  Eukaryotic type   Meiosis-specific proteins    Others     108844712 SSDB OrthologParalogGFIT Motif Pfam:  SHOC1_PDDEXK_dom SHOC1_2HhH SHOC1_HhH_tandem ZIP2_M Motif Other DBs NCBI-GeneID:  108844712 NCBI-ProteinID:  XP_018473506 UniProt:  A0A6J0MPR3 A0A9W3CJL3 LinkDB All DBs Position 3:complement(21043374..21053049) Genome browser AA seq 1608 aa AA seqDB search MRGRFLNVDYFSIPPSQVYEALGFLNLPAPDDFPPPLFRDTREEFLRFEPVEGFSLPIED LPIGDALSRFLSDVVPDRVSVDYGAFEMDYSSLGDELRFILRRGDPRFLEKSEGDAVEEK ATLDFNIVQLETPEMDFEMENKLSSKIEDLQCLSKVLEIRNEPVKFEESDVVLKNSSDIK QKIYSVDCVSSDYFTEKSTSVKEDECFRKNRPWFRDAVFPLLEVDEVNLNELSSLSMLDK VFAVLETIEPRDMDTESSLGLNSKELIGSKGYDILDILSTDCYSNKSVQSDVVPQEIDIV TILEIPNPVESFQFGQGKLAVDVVSVSFEEVQILDVEMYDVFGSFLCLQQATEPEICPGM FSEEMNFKNFDELVVSSELAFADDAFKSLPIPILHDYEMTRSLELIYENYLSKIKPQAFP ASNDIYLPLNLLEETKHSHEAHFCDYLSEEIVTCNIDYDLESLEGDKWVYDFVLSEDAFC QPLVERCTEPFCGISTLDEHPPVNTSHGLLEHPCPETGAGDCGRDDHAKKAAMLFKSMSA FDDLSFFMDPQKAVIEENLESRVEAAKTVNHKITSTDSKAPCISGGGMHPSSKTEDMKVH SVRPSENILALVRDFEKSYLTLVKDDEDLISTLSEDKLKLLSISKGKLIDCIRKANVHKT WSSDDKTFTFALLLAIKQMTWYLCFFGIRVAYLYLNKLCRSSNPMKLGLHTLYSSFESEH MSTEGDITRSHPSLAVIHGILQSKCVRGNSKALLLAEKVFWSSLKRLLVSMGLSYNELNS PSPSGNQPNLNEATELCILPTTDCLLVAYERISPSFRVENFTVIVEYGGPNASPRVSSPL KLDSCPCFHFIKVELDMSSACGQLSAGVTVPYSLKMVKGDEYETKTGWLEEVLNFVPLES LCSAESSESTKESKSDFVPRESGRKIGINEQGVLSDQIAVIVVNTKTVDKEMIISRRSTY QKVLAMEKEGVQVVERDSDLPVDLMLSPAICLVWYDCGSVSKKSDATIGASSSSLSWIGD IATNVLTSLSFGFSTCVMVFEGEPTCLATVMDSSDELYAAAGSLGINLQIFCSSSAKLTD AIILRCIKSSVKSSQVHAKMPESESLAESFLTKFPSVNPLTAHVILSSTGSLLEFMKLPH TSKVQMLQKYHVPEESVELFSSLSRYGAREDSKSVMTDSSSSVSSGHDSDAHHFSVHSGS KRKQYITGKDETNMDDFVHCVPSTEFAGMKRKPSGDFQLDDPWSSRDHEMFHFDPVTEFP DAPLKPSGIIHRNDSWPSKDPERFDKNSGPGSSSKDTFWENDFGVEENLPGFESWSLPVT DDFMSQNRGRKLPVMGEANLHDTRNSENFMGDFKGEVINIENNKFLEEDFPPSPAYNRYS PTVSHVAEDPRKSKSARKLSFSGSIQPIFPTSAEINFNSERLPTESTTPSRGYVDNFPAK RQRTLLEEVLTRRSAVSTTDHPFQEEISHFGGSPLSNAIRSPDPVQGSPWTVDFLNRVRE RSTERKQKQSLPSYITPSSLEARGDPKKPNIKRKSPSMLEFFKHKGGNARSRVPEERKQK RFKNSSASPQNERFDSILRSTTPIDKRAKQTLSFAVNGSGRQTKLVWK NT seq 4827 nt NT seq  +upstreamnt  +downstreamnt atgcgaggtcgatttctcaacgtcgattacttctccattccaccttctcaggtatacgaa gccctaggcttcctcaacctcccggctcccgacgatttcccgcctcctctcttccgcgac acgagagaagagtttctccgattcgaacctgtcgaaggcttctctctcccgatcgaggat cttccaatcggagatgcgttgtcgaggttcctctccgacgtggttcccgatcgcgtcagc gtcgactatggagccttcgagatggattactcctccctcggagacgagctgaggtttatt ctccgccgtggagatcctcggttcctcgagaagagtgaaggagatgccgttgaggagaaa gctacactagattttaacattgttcagctggagactccagagatggatttcgaaatggag aataagctctcatccaagattgaggatctccaatgcctctccaaagttctagagatccga aatgagccggttaagttcgaggagtcagatgttgttctaaagaactcaagtgacatcaaa cagaagatttattctgttgattgcgtttcttctgattactttacggagaagagtacttcg gtgaaagaagatgaatgcttccgcaagaaccgaccatggttcagagatgcggtatttcct cttctagaagtggatgaagtaaacttgaacgaactatcaagcctgtctatgcttgataaa gtatttgctgttcttgaaacgattgagcccagagatatggatacagagagttctctcggt ttgaattctaaggagcttataggctctaagggttatgatatattggatatcctctctacg gattgctattcaaacaagagtgtccagtctgatgtggtaccgcaggagattgatatagtg actatcttggaaataccaaatcctgtggaaagctttcagtttggacagggaaagctggct gttgatgtggtctcggtaagttttgaggaagttcagatcttggatgtggagatgtatgat gtttttggtagcttcctttgtctgcaacaagccactgaaccagaaatatgtcccgggatg ttcagtgaagagatgaacttcaagaatttcgatgaattagttgtcagttctgaacttgcc ttcgcagatgatgctttcaagtctctgccaattcctatcttacatgattatgagatgaca agatctctggaactcatttatgagaattatttgtcaaagatcaagcctcaagcctttcct gcatcaaatgacatatacttgccgttgaaccttcttgaggagacaaagcacagccatgaa gcccatttttgtgattatctgtctgaagaaatagttacatgcaacattgattatgatttg gaatctttagaaggagacaaatgggtttatgatttcgtgctctctgaagatgctttctgt cagccacttgtagagagatgcactgaacctttttgtggtatatctacccttgatgagcat cctccagtcaatacttctcatggtttattggaacacccttgtccagaaacaggagccggt gattgtggaagggatgatcatgccaaaaaggctgccatgttgttcaaatcaatgtctgct tttgatgacttaagttttttcatggatcctcagaaagctgtgattgaagagaatcttgag tctagagtcgaagctgctaagactgtcaaccataaaattacgtccactgactcaaaggct ccatgtatatctggtggtggcatgcacccaagctcgaagacagaggatatgaaagttcac agtgtgcgcccttcagaaaatattctggcccttgttcgggattttgagaagagctattta actctcgtgaaggatgatgaagatttgatttcaactttatcagaagataaactgaagtta ctcagcatttcgaaaggaaagcttatcgactgcatacgaaaggcaaatgtccacaaaaca tggtcatcggatgataagactttcacgtttgcattgctactagcaattaaacagatgaca tggtatttatgtttctttggtatccgtgtggcatatctctatcttaacaagctatgtcgg agctcaaatcccatgaagctaggattgcacacgctttactcatcatttgaatcagaacac atgtcaactgagggagacatcactagatcacatccatccctagctgtcatccatgggatt ttacagtcaaaatgtgtccgtgggaattccaaagcgttacttttggcggagaaagttttt tggtcctcgctgaagaggctattggtgtctatggggttatcttacaatgagctcaacagt ccgtccccaagtggaaatcaaccgaatcttaacgaagcaacagaactctgtatcctgcca accacagactgtctacttgtcgcttacgagcgcatttctccatcttttcgtgtggagaat ttcaccgtcattgtagaatatggaggtccaaatgcgtcgcccagagtctcatctccttta aagttggactcctgtccttgctttcattttataaaagtggagctggatatgtccagtgcg tgcgggcaactctctgcaggtgttacagtaccttatagtctcaaaatggtaaagggagat gaatatgagacgaaaactgggtggttggaagaagtgttgaactttgttccacttgaaagt ttgtgttccgctgaatcttcagaatctacgaaggaatctaaatctgacttcgtgcctcga gaatctggaagaaaaattgggataaatgagcagggagttctctctgaccaaatagctgtg attgtagtgaacacaaaaactgttgacaaggagatgataatatccagaagaagtacatat caaaaggtcttggcaatggaaaaagaaggagtgcaagttgtggagcgcgattccgatcta cctgtggacctgatgctaagtcctgcgatttgtctagtctggtatgattgtggaagtgtt agtaagaagtcggacgcaactattggtgcttcctcaagctcactttcatggattggggat atcgcaaccaatgttttgacgtcattgagcttcggtttcagcacctgtgttatggttttt gagggggaacccacttgcctggctacagtaatggactcttctgacgaactgtatgcagca gctggcagcctgggaatcaatttacagatcttttgctcatcatcagctaaattaactgat gcaattatactgaggtgtatcaaatcttctgttaaatcttcacaagtccatgccaaaatg cccgagtcagaatctcttgcagaatcatttctcaccaagtttccttccgtgaatccactg acagctcatgtaattttgtcatctactggatcacttctcgaattcatgaagctcccacat actagcaaggttcaaatgttgcaaaagtaccatgtacctgaagagagtgttgaactcttc agttcattatccagatacggtgcgagggaagactccaaatctgtaatgacagacagctct tcttctgtatcttctggacatgactcagacgcccaccatttcagtgtccattctggttcg aaaaggaaacagtacattactgggaaagatgagactaatatggacgactttgtccattgt gttccctcgacagagtttgctggtatgaagcgcaagccttcaggggatttccaacttgac gatccttggtcatctagagatcatgagatgtttcattttgaccctgtcactgaattccca gatgcacctctcaaaccttctgggatcattcatcgtaacgactcttggccatctaaagat cctgagaggtttgacaagaactcaggacctggttcttcatcaaaggacacgttctgggag aatgattttggagtcgaggaaaaccttcctggatttgaaagttggagtttacccgttacc gatgatttcatgagtcagaacagaggacgcaagcttcctgtgatgggagaagctaacttg cacgacactagaaactcagagaacttcatgggagacttcaaaggtgaagttatcaacata gagaataataagtttctcgaggaagacttccctccttctcctgcttataacaggtactct ccaacagtttctcatgttgctgaagatccgagaaaatccaagtctgcaaggaagttatct ttctctggatctatccagcctatcttcccaacgtcagctgagattaacttcaattctgaa aggctacccaccgaatcaactactccttcgcgtggctatgttgataacttcccagcaaaa cggcaacggactcttctggaagaagtcttaacacggagatctgcagtttccacaacagat catccatttcaagaagagatttcacattttggtgggtctccactatcaaacgcaatccgt tctccagatccagtacaaggttctccttggactgttgatttcctcaacagagtcagagaa aggagtacagaaaggaagcagaaacaatctcttccttcttatatcactccctctagtttg gaagctcgaggggacccaaagaaacctaatatcaagaggaagagtccttccatgctagag tttttcaagcataaaggaggcaatgctcgtagcagagttccagaagagagaaagcagaag cggttcaagaattcttcagcctcgccacaaaacgagagatttgactcgattcttaggtcg actacgccaattgataagcgagcaaaacagactctatccttcgctgtgaatggatctgga aggcaaacaaaactggtctggaagtag

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