Raphanus sativus (radish): 108844793
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Entry
108844793 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108844793
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108844793
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108844793
TFIIIC, fungi type
108844793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_2
TPR_14
ARM_TT21_4th
TPR_16
TPR_12
TPR_20
TPR_8
TPR_17
TPR_CcmH_CycH
ANAPC3
ARM_TT21
TPR_1
TPR_10
SNAP
TPR_Slam
TPR_15
DUF7017
RIG-I_C
HAT_PRP39_C
PSMD12-CSN4_N
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
108844793
NCBI-ProteinID:
XP_056864697
UniProt:
A0A9W3DM06
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All DBs
Position
1:7828155..7835210
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AA seq
909 aa
AA seq
DB search
MEDKGKGVVGEDEEKSFSVLEGGPSNVEVDGGDGSGDNYDDDEDENSDEGGQVHDDDDDD
DDEGEGDESEEEEEEEGDDSEAGSGIPTTLERLEYGALAEKKRKALADSRRDGSEKRGKF
DDINISGEKEYMELIYSGRRRKKRKNKKRGRRKGSNKEVSPEIRKKLSEAYLLYAGDKDS
EALPILVEIIKEAPTFDNAYHCLSLVSEKLGKTDSSSTEALKIAANLKGPKSPFWILIYE
RAMEQGDMKFARIYASKAIQADPENESLRYEYADLCVRAGRYKEAAETYEQIFRRWPNKR
IEPLKWGTEYFLKSGEGERAANNLEDHIKSHPSEVGADILDLLADVLMQINAYDRALKYI
HDVRQIYNPGKELPSSLKIRQAICHVRLKEMEQAEIVLSILPREAVSERPDLVIYLADEL
TNTGNFHSALKYYLLAVNDTVNNGDWFVKVARCYMSLANREQAINFYYKALNELSDTIDA
RITLASLLLEDGKRDEAISVLSPPENPDLDTTKQKAWWKKKKIRMHLCQIYYSEGMLEEY
ANTALQLVLKWVWRRTVKGKRKRSGLSELQRNKRRRRPRDAFASELRGGPKKWRKDRATL
NETKRIRDRAAVKAHNEDICSESEEEAMKDEEYHRLFVDLCKAFASLQRYWEALEIVNLA
RRLDAKMLPVEKKKELQSLGAKISCDTLDPKLWSDCVRSVIQEHPRCLNAWNCYYKVISR
QGKRASSDAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLIN
LCVGAALINLALGFRLKNRHECLAQGFAFLYNNIRICGNSQEALYNVARAYHHVGLVTLA
ASYYEKVLAIYEKEYPMPKLPNEEPNVAEERKPVNCDLRKEAAHNLHLLYKHSGAFDLAR
QVLKDHCTF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagggaaagggtgtggtgggagaagatgaggaaaagtcattttctgtgtta
gaagggggtccaagcaatgtggaagtagacggtggtgatggtagtggtgataactatgat
gatgatgaagacgaaaacagtgatgaaggaggccaggtacatgatgatgatgatgatgat
gatgatgagggagagggagatgagtcagaagaagaagaagaagaagaaggggatgactct
gaagctggaagtggaattcctaccacattggaacgtcttgaatatggagctctggctgag
aagaaacgcaaagcacttgctgattctcgacgtgatggctcagagaagagaggcaagttt
gatgacattaacatctcgggcgagaaggaatacatggaactcatctattctggccgccga
cgaaagaaaaggaagaataaaaaaaggggtagaagaaaggggtcaaataaagaagtttca
cctgaaattcgtaagaagttgagtgaggcttatcttctttacgcgggtgataaagacagt
gaggctttacctattttagtagagattattaaggaagcaccaaccttcgataacgcgtat
cattgcctatctcttgtatctgagaaacttggtaagaccgactcatcgtctactgaagca
ttgaagattgctgcaaatttaaaaggtccaaaatcacctttttggatcttgatttacgag
agggccatggaacaaggggacatgaagtttgcaaggatttatgcgtccaaagcaatacaa
gcagatccagagaacgaatctttgagatatgaatatgcagacctctgcgtacgtgctgga
agatataaagaagctgccgaaacctatgagcaaatatttcgtcggtggcctaataagaga
attgagccactcaagtgggggacagagtattttctaaaatccggcgagggtgaacgagca
gcaaacaacttagaggaccatataaaatctcatccatctgaagtgggagccgatatattg
gatctactggctgatgttttgatgcaaattaatgcctatgatagagctcttaagtatatt
catgatgtgcgccaaatttacaatccaggaaaggaactgccttccagcttaaaaatcaga
caagccatctgtcatgttcgcctcaaagaaatggagcaagcagagattgttttaagtatt
ctaccacgggaggctgtatctgaacggccagatctcgtcatctatttggctgatgagcta
acaaacactgggaattttcactctgctctcaaatactatttgttagcagtcaatgacact
gtgaataatggggattggtttgtgaaagttgctcgctgttatatgtcgttggcaaaccga
gaacaggctatcaatttctattataaagctttgaatgaactcagtgatacaattgatgct
cgcataactctggcttcacttctcctagaagatggcaaacgagatgaagctatatcagtg
ctctctcctccggaaaatccagatcttgatactactaaacagaaggcatggtggaagaag
aaaaagatcaggatgcatctttgtcagatctattattcagaggggatgcttgaggaatat
gccaatacagcattgcagttggttcttaagtgggtttggcggcggacggtcaagggaaaa
agaaaacgatcgggtctttcggagcttcaaagaaataaaagacgccgacgtcctagagat
gcttttgcttcagagttgagaggcggacccaaaaagtggcgcaaagacagggcaacatta
aatgaaacaaaaagaatcagagatcgggctgctgtcaaagctcataacgaagatatctgc
tctgaatctgaggaagaagctatgaaggacgaagagtatcaccgtctctttgttgatttg
tgcaaggcatttgcatcgctgcaaaggtattgggaagctctggagatagttaacctggct
cgtagattggatgccaaaatgctacctgttgagaagaaaaaagagcttcagtcacttgga
gctaaaatatcatgtgatactctggatccaaagctgtggtccgactgtgtaagatctgtc
attcaggaacatccacgttgtttgaatgcctggaactgctattacaaagtcatttcaaga
caagggaaaagggcatcgagtgacgctaagttcatgcatcacttaagaagcaagtacaga
gattgcgtaccgcctattctgatcgctggtcatcatttcaccgtgacaagccggcatcaa
gatgctgcaagagaataccttgaagcatataaactaatgccagagagccctttgattaac
ctctgcgtaggagctgctttaatcaacttagcactcggtttccgactcaagaaccggcat
gagtgtcttgctcaaggctttgcgtttctatacaacaatataagaatctgcggtaacagt
caagaggcgttgtataacgttgctcgggcgtatcatcacgtagggcttgtgactcttgcg
gcctcttactacgagaaggttttagcgatctacgagaaagagtatccaatgccgaaactc
ccgaacgaagaacctaatgttgcggaagagcgtaaacctgttaactgtgacctacgcaaa
gaggctgctcacaatctgcatttgttatataagcacagtggagcgtttgatctcgcgagg
caggtcttaaaggatcactgcactttctga
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