Raphanus sativus (radish): 108844856
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Entry
108844856 CDS
T06014
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108844856
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108844856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
108844856
NCBI-ProteinID:
XP_056856029
UniProt:
A0A9W3CX15
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MKYPKGGGFKRGGKKGSNDSDPFFEQETKKRRKVSYDDEDIESIDSDAEENGFNGEDRKE
ADVAEEEDEFADETAGEKRKRLAEAYLLRTREAQRREREELDDDEDNDDDDIVKTLMKKQ
QEDSGRVRRALASSVQEPLSSDEFSIIVKHRKSVVSVALSDDDTRGFSASKDGAIVHWDV
SSGKTDKYKWPSDEVLKSRGMKVREPRSKKHSRESLALAVSSDGRYLATGGVDRHVHIWD
VRTREHVQAFPGHRNTVSCLCFRHGTAELYSGSFDRSVKAWNVEDKAFVQDSFGHQDEIL
AIDALRKERALTVGRDRTMLLHKMPEASRTIYRAPASSLESCCFISDTEYLSGSDNGTVA
LWGMLKKKPVFLLKNAHSVVADGIATNENGEHDNVEYNNSSTSSWVSSVAVCRGSDLAAS
GAGNGFVHLMAVEPSAIRPLFKLPLTGFVNSMAFAKSGKFLVAGVGQETRFGRWGCIKSA
QNGVAIHPLRLS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacccgaaaggtggaggctttaagagaggcggcaagaagggttcgaacgattcg
gatcccttcttcgagcaggagacaaagaaacggaggaaagtcagctacgacgacgaagac
atcgagtctatcgactccgacgccgaagagaacggctttaacggcgaagataggaaagaa
gctgatgtagctgaggaggaggatgagtttgcagatgagacggctggtgagaagcggaag
aggttagctgaggcgtatctgctgcgaacgagggaagctcagaggagggagcgtgaagaa
cttgatgacgacgaagacaatgatgatgatgacattgtgaagactttgatgaagaagcag
caggaggatagtggtagggttcgaagagcccttgcatctagtgttcaggagccactgagt
agtgatgagtttagtattattgtcaagcaccgaaaatctgttgtatctgttgctctctct
gatgacgacactagaggattctcagcttccaaagacggtgctattgtccactgggatgta
tcttctggtaaaactgacaaatacaaatggcctagtgatgaagttctgaagtctcgtggg
atgaaagtgagggagcctaggagcaaaaaacacagtagagagtctcttgctttagctgtt
agctctgatggtcgttacttggcgactggtggagttgatagacatgttcatatatgggac
gttcgtaccagagaacatgtccaggcctttccaggtcacaggaacactgtttcttgctta
tgtttcagacacgggactgcggagctctactctggttcttttgatcgaagtgtcaaggcg
tggaatgtggaagataaagcttttgtgcaagacagttttggacaccaggatgagatacta
gccattgatgcactaaggaaggagcgtgcacttactgttggaagagatagaaccatgcta
ttacacaagatgcctgaggcaagccgtacgatataccgtgcacctgcatcttctcttgag
agctgctgtttcatcagtgatactgagtacctgtctggttcggacaacggaactgttgca
ctttggggaatgctaaaaaagaaaccggtgtttctcctcaagaatgcacattccgttgta
gctgatggaatcgccactaatgaaaatggtgagcatgataatgtggagtataataactct
tccacgagttcttgggtcagttcagttgctgtttgcagaggtagtgaccttgctgcatct
ggagctggtaatggttttgtgcatttgatggctgttgaaccaagtgccattcgaccttta
ttcaagcttccactgactggatttgtgaactccatggcttttgcgaaatccggtaaattt
ctggttgctggtgttggacaggaaacgagatttggaagatggggatgcataaagtctgcg
caaaatggtgtggcaatacatcccttaaggctgtcataa
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