Raphanus sativus (radish): 108844905
Help
Entry
108844905 CDS
T06014
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108844905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108844905
03036 Chromosome and associated proteins [BR:
rsz03036
]
108844905
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108844905
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108844905
PBAF complex
108844905
GBAF(ncBAF) complex
108844905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
bZIP_2
Motif
Other DBs
NCBI-GeneID:
108844905
NCBI-ProteinID:
XP_018473692
UniProt:
A0A6J0MMG7
LinkDB
All DBs
Position
3:25699730..25701971
Genome browser
AA seq
519 aa
AA seq
DB search
MFGNNSNNPQGSAPPLPFRMPSASVPGGFTQSHMATNIQAPFQFNQPQSKVHAQMQAQIQ
AGMTMNQAPEIGVLGGPSSPSMTTTPGSSSNVKRLQQRPPMRPPPSGFPNNTVTPMRTME
LTPAAARSKKKQKLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKN
PPCLQKTLRIYVFNSFANQTNAIPGNIPNADDPPPTWTLKVVGRILEDGVEHPDQTGFVQ
KDNPLHPKFSSFFKKVQVSLDQRLYPENPLITWENSRSPAPQEGFEIKRKGNQEFAATIR
LEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSYFNCDAALQK
VFGEQKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAVSACYDVLVDVPVTIQRDLS
NLLANAEKSKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFVNALMESQSKDLKV
VAGEASRNAERERGSDFFNQPWVEDAVIRYLNRRPAAGN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaacaacagcaataatcctcaaggctctgcgcctcctttgccattcaggatg
ccctctgcgtctgttcctggaggctttactcagtctcatatggcaactaacattcaagct
ccgtttcagttcaatcaacctcagtctaaagttcatgctcaaatgcaagctcagatacaa
gcaggcatgaccatgaaccaagccccggagattggtgttttgggaggtccttcttcgcct
tctatgaccactactcctggaagtagttcaaacgtgaagaggctccagcagagaccgccg
atgagacctcctccttccggtttccccaacaacactgtcacccccatgagaacaatggag
ttaactccagctgctgcacgtagtaagaagaaacagaagcttcctgagaagtccttgcag
gaacgtgtggcggcgatcttgcctgagtccgccttatacacacagcttctcgagttcgag
tctcgtgtcgacgctgcgttgagtagaaagaaagttgacatccaggaagctctcaagaac
cctccctgcctacagaagacgcttcggatctacgtattcaactccttcgctaaccaaacc
aacgcgattcctgggaatattccaaatgctgatgaccctcctccaacgtggactcttaaa
gttgttggtaggatcctggaagatggggtggagcatccagaccagacagggtttgttcag
aaagataacccattgcatcccaagttctcttctttcttcaagaaggtgcaggttagcctg
gatcagaggctttatcctgagaacccattgatcacgtgggagaactctcgttcacctgct
cctcaggaagggtttgagataaagaggaaagggaatcaggagtttgcagctactattagg
ttggagatgaactacgtccctgagaagttcaagctttctaccgcattgatggatgttctt
gggattgaggttgaaaccaggccgagaatcatcgctgcgatttggcattatgtcaaagcg
aggaaactgcagaacccaaacgacccttcttacttcaactgcgacgctgcgcttcaaaaa
gtgtttggagaacagaagctgaagttcacaatggtctctcagaagatatctcatcacttg
tcacctccaccacctattcacttagaacacaagatcaagctgtcaggaaataacccggcc
gtatcagcgtgttacgatgtcctggtggatgtacccgtcactatccaaagggatctgagc
aacttgttggccaacgcagagaagagtaaagagattgaggcttgtgatgaagcgatatgt
gcagccataaggaagatacatgagcataggaggagacgggcatttttcttggggttcagc
cagtcaccagttgagttcgtaaacgcgctgatggaatcgcagagcaaggatctgaaggtc
gtggccggagaagcgagtcgaaatgctgagagagagcgtggatcagacttctttaaccaa
ccttgggtcgaagatgcagtgatacgttacttgaaccggaggccagcagctgggaactag
DBGET
integrated database retrieval system
