Raphanus sativus (radish): 108844947
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Entry
108844947 CDS
T06014
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108844947
09122 Translation
03015 mRNA surveillance pathway
108844947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108844947
Spliceosome [BR:
rsz03041
]
Complex A
Other components
Complex A specific factors
108844947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108844947
NCBI-ProteinID:
XP_056861073
UniProt:
A0A9W3DCF2
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Position
3:complement(23086103..23089358)
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AA seq
367 aa
AA seq
DB search
MSGVYNQDGGDGRYGGHGGGSRGNRAGGGYQGGDRGGRGGGGGGRGGGGRDGGGRDGDWR
CPNPSCGNVNFARRVECNKCGAPAPSGTAGDRGGSRGGGASDRGGGRSYESSRYDGGSRS
RSDGGGGGSYGSNSQHRDNGPTPPPMAAIPSYDGSGTYPPPMGYGMETVPPPSSYAGGPT
GGYGGDAPRGGRGGGYDALRRQEPSYGDAPAEKVKQCDANCDETCDNARIYISNLPPDVT
TDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGKNKGDACLAYEDPSAAHSAGG
FFNNYEMRGSKIGVTMAEKSAPKAPAFDQRGGGRGGGGGYGGVDRRRDNYGSGPDRNHHG
GNRSRPY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgtgtacaatcaagacggcggcgatggtcgatacggtggtcacggcggtgga
agtagaggaaaccgagctggtggtggataccaaggaggtgatcgcggtggaagaggaggt
ggcggcggcggtagaggtggtggtggcagagacggtggcgggagagacggtgactggcgt
tgccctaacccaagttgtgggaacgtgaactttgcaaggagagttgaatgtaacaagtgt
ggtgcacctgctccttctggtactgctggtgatcgaggagggagccgaggtggaggtgcc
agcgatcgtggtggtggtaggagctacgagagtagtagatatgatggtggcagtaggagt
agaagtgatggtggtggtggtggctcttatggtagtaatagtcaacatagggataatggt
cctacacctccacctatggcagctattccatcctatgacggttctggcacgtaccctcca
cctatggggtatggaatggaaacagttcccccgccttcaagctatgctggtggtcccaca
gggggttatggcggtgatgcaccgaggggtggtagaggtggtggctatgatgctcttcga
cgccaggaacctagttatggagatgcgcctgctgaaaaagtcaagcagtgcgacgcaaat
tgtgatgaaacttgtgataatgctagaatatacatctctaatttacctccggatgtgacc
actgatgaactcaaagatctcttcggtggcattggccaagttggaagaatcaagcagaag
cggggttacaaagatcagtggccttataatatcaagatttacactgatgagaagggaaag
aataaaggtgacgcctgcctggcttatgaagatcccagcgccgcacactctgcaggcggc
tttttcaacaattatgaaatgagggggagcaagattggtgtaacgatggcagagaagtct
gcgcccaaagctcctgcttttgaccagagaggcggtggtagaggagggggaggtggctat
ggtggggtagatagaagaagagataactatggctcaggaccagacagaaaccatcatggg
ggaaaccggtctcgtccatattga
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