Raphanus sativus (radish): 108844964
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Entry
108844964 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipase D gamma 1-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00564
Glycerophospholipid metabolism
rsz00565
Ether lipid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108844964
00565 Ether lipid metabolism
108844964
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108844964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108844964
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108844964
Membrane trafficking [BR:
rsz04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108844964
Endosome - Golgi transport
Others
Others
108844964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
108844964
NCBI-ProteinID:
XP_056862101
UniProt:
A0A9W3DE56
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All DBs
Position
3:3412246..3416256
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AA seq
803 aa
AA seq
DB search
MSMEGSSTGSLRVVLLHGNLDIWVKEAKNIPNKERFQRYKKNRTKIGKTFVIDNNENPVW
MQHFYVPVAHHATVVKFVVKDSDRFGAKFIGAVGIPTEELCSGNTIEGLFPILNSNGKPC
KKGSVLSLSIQYTPVEMMKIYQMGVGNECEGVPGTYFPLRKGGRVTLYQDAHVEDGTLPS
VDLDGGMKYLHGKCXEDXADAIRQAKNLIYITGWSVYHPVRLVRRNNDPTDGTLGYLLKE
RSQEGVRVLVLVWDDPFSRSFMGCRTPGFMKTSDEETRHFFKNSSVQVIICPRSCRKSLH
SFVKKTEVGTIYTHHQKTVIVDAEAAQGRRKIIAFVGGLDMCKGRFDTPNHPLFRTLKTL
HKDDFHNPNFGTTAEDAPRQPWHDLHCKIDGPAAYDVLANFEQRWLKASEKRHRFLIHRS
SSEDALLKIDRISNIMGVSEASFDENDLESWHVQVFRSIDSTSVKGFPNDSKETSEKNLL
CGKNIFIDMSIHMAYVKAIRSAQHFIYIENQYFLGSSFNWDSHNDVGANNLIPMEIALKI
ACKIRAREKFAAYIVIPMWPEGDPANPGMQSILYWQYNTMQMMYQTIYKALVEAELDGQY
EPQDYLNFFCLGTREVGDEIANVYSPGSPPKKNAKANASQVEALKSRRFMIYVHSKGMIV
DDEFVLIGSANINQRSLKGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLG
FLEQSFEEPENMECVRRVRELSEINWRQYAAEEVTEMTSHLLKYPVQVDRTGRVSSLPGC
ETFPDLGGKIIGTFYVFKEYLTI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggaagggtcaagtacgggttctttgagagtggtgttgttacatggtaactta
gacatttgggtgaaggaagctaaaaatattcctaacaaggaacggttccagaggtacaaa
aagaaccgtacaaagattggcaaaacttttgtgatcgacaacaatgagaatcctgtgtgg
atgcagcatttctatgtaccggtggctcaccatgcgacggtggttaaatttgtggtgaaa
gacagtgaccgttttggagccaagttcataggagctgttggaatcccaaccgaggagtta
tgttcagggaacacgatcgaagggctgttcccgatacttaacagtaatgggaagccatgt
aaaaagggttctgtgttgagtttgtctattcaatacactccagtggaaatgatgaaaatt
taccaaatgggtgttggtaatgagtgcgaaggagttcccggtacgtacttccctttgagg
aaaggcggtagagttactctgtatcaagatgctcatgttgaagacgggacacttccgagt
gtagatctcgatggtgggatgaagtatctacatggaaagtgctaggaagatngggcggat
gcgattagacaggcaaagaacttgatttatatcacaggttggtcagtttaccatccggtt
aggctggttcgtcgcaacaatgatccgaccgatggtacattaggttatttgcttaaagaa
agatctcaagaaggtgttagagtgttggttctggtgtgggatgatccgttttcaaggagc
tttatggggtgcagaacacccggatttatgaagacaagcgatgaggagactcgccatttt
ttcaagaactcgtcggtgcaagttattatttgtcctagatcttgtaggaaaagtcttcac
agcttcgtaaaaaaaactgaagttggaactatctacacacatcatcaaaaaactgttatt
gtagatgctgaggcagctcagggccgacgaaagatcatagcgtttgttggagggctagac
atgtgcaaaggacgttttgatactcctaaccatcctctctttaggacattgaagacgctt
cataaagatgacttccataacccaaactttgggactactgctgaagatgcaccaagacaa
ccgtggcatgatttgcactgcaagattgatggtccggcagcgtatgacgtgcttgctaat
tttgaacaacgttggctaaaggcttcggagaaacgtcacagatttttgatacatagatcg
tcttctgaggatgctttgcttaagattgacagaatttcaaatatcatgggagtatcagaa
gcttcttttgatgagaatgatctagagtcttggcatgttcaggtttttcgttccattgat
tcaacctcagtcaaagggtttccaaacgactcaaaggaaacaagtgaaaaaaatcttcta
tgtgggaagaatatattcatagacatgagcatacacatggcttatgttaaggctataaga
tctgctcagcatttcatctacatcgagaaccaatattttttgggatcatcattcaactgg
gattcacataacgacgttggtgctaataatcttatccctatggaaatcgcacttaagatt
gcgtgtaagattagagctagggagaagtttgctgcttatattgtcattcctatgtggcca
gaaggtgatccagcgaatccgggtatgcagagcattttatactggcagtataataccatg
caaatgatgtatcaaactatctacaaggcacttgtggaggctgaacttgatggtcagtat
gagccacaagactatttgaacttcttctgtcttggaaccagagaggttggtgatgaaata
gctaatgtttatagtccgggaagtccccctaagaaaaatgcaaaggcaaatgcctcacag
gtggaagctttgaagagtcgaagattcatgatatatgttcattccaagggtatgatagtg
gacgatgagtttgttttaattggttctgcgaatatcaaccagagatccttgaaaggaaca
agagacactgaaatcgccatgggagggtatcaaccacaccattcatgggctaagaaaggt
tcacgtcctcgtggtcagatctttggatacagaatgtcgttgtgggcggaacatctaggg
tttctagagcaaagtttcgaagagccagagaacatggaatgtgtgagacgagttagggaa
ttgagtgagatcaactggagacagtatgcagcagaggaagttacagagatgacaagtcat
cttcttaagtatccagttcaagtcgataggacaggcagagtgagttctcttcctggatgc
gagacattcccagatctcggtggcaagattataggcacgttctatgtgttcaaagaatac
cttaccatctaa
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