KEGG   Raphanus sativus (radish): 108845042
Entry
108845042         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108845042
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108845042
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108845042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rsz03011]
    108845042
   04121 Ubiquitin system [BR:rsz04121]
    108845042
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108845042
Ribosome [BR:rsz03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108845042
  Archaea
    108845042
Ubiquitin system [BR:rsz04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108845042
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108845042
  Exosomal proteins of colorectal cancer cells
   108845042
SSDB
Motif
Pfam: LRRC37AB_C Psidin_C DUF8051 Psg1 DUF2207_C DcuC SID-1_RNA_chan DUF5385 MiaB_C Peptidase_M56 EphA2_TM Orf78 Vpu
Other DBs
NCBI-GeneID: 108845042
NCBI-ProteinID: XP_056845560
UniProt: A0A9W3C228
LinkDB
Position
1:10480386..10481222
AA seq 180 aa
MLIEKSLYISKSSSISLHIFTTLAKHKVTTLMAYNLLLTVLIVLVSLSLAYSYFHPTRDV
LFKQDNDESYSMATSEQGSSMIDVEDLVKARVLEALLAGSKVVVNKASNNTSSESSKKKK
YKSRVVLPLEVLAIILAVIIIICVIDFFYEKHKTKKAQSLGQEKADESSKIQTSKTEDVV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcttatagagaaatcattatatatctcaaaatcttcttccatttctcttcatatattt
actacattagcaaaacacaaggtgacaactctaatggcttacaatcttcttctcaccgtc
ctcatagtactcgtttccctttctctagcttacagttattttcatcccacaagagatgtt
ttgtttaaacaagacaatgatgaatcatactctatggccacgagtgagcaagggtcatcg
atgattgatgttgaagatctagtgaaagctcgagttcttgaagctctacttgctggctca
aaagtggttgtgaataaagcttctaacaacacttcatccgagagttcaaagaagaaaaaa
tataagagcagagtagtactaccattggaagttttagcaatcatactagcagtaattatt
atcatctgtgttatagactttttctatgagaagcacaaaacaaaaaaggctcaaagtctt
ggacaagagaaagcagatgaatcatcgaaaattcagacttccaaaacggaggatgttgtc
taa

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