Raphanus sativus (radish): 108845125
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Entry
108845125 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108845125 isoform X1
KO
K23288
syndetin
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108845125
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Others
EARP complex
108845125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Xre_MbcA_ParS-like_N
Motif
Other DBs
NCBI-GeneID:
108845125
NCBI-ProteinID:
XP_056851608
UniProt:
A0A9W3CJZ2
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MQPNLFPFGSVLGNPFLFNGGDLSEGGFESSRVFFLLPLLLSQGEGMDLSKVGEKFLSSV
KSATSLGLLPSSSSSDRPEIPARAAAAAAVARALAGLPPDQRLSISSTATELSSIYGNRL
PPQEVEELEEGFYEEDFDPVRHILENVPDEDQSELAYFEKQATLRLVQLDRVAESLSHHV
MEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHTHSKKKQALLD
MLPILTDLRHARVMQSSLEDLVEEGNYCKAFQVLSEYLQLLDSLSEFSAIQEMTRGVEVW
LGRTLHKLDSLLMGVCQEFKEDSYIMVLDAYALIGDVSGLAEKIQSFFMQEVISETHSVL
KTVVGEDNSSATQFSRLTYSDLCIQTPESKFRQCLLRTLAVLFQLIYSYHQIMSFTPEKK
VENLISTSSATTKKIDLVTDTACNPQDGGLSSTMSSTSIPSCTISAEESVGSETSSPLQQ
ASNNAVDEPRDSGETVSNGESPWYYLRKESAGFVSETLQRGRRNLWQLTTSRVSVLLSSP
AASSTSIHQFLKNYEDLSVFILAGEAFCGFEVVDFREKLKAVCENYFTAFHRQSMHALKM
VLEKETWTRLPPDTVQAINFAGLVGDGAPLIISSRSASGSSRFPLSTDPSGNRSGGFSYW
LKSGNPFSAKLTYYREDQDYSSDSGAASEDQDYSSDVVNSKVRNKKSINGGSPASGDENE
DLHADYIDEDSQLPRRSFTRSISRTSFSHLSTNDDLKAQTGSSLCLLRSMDKYARLMQKL
ELVNVEFFKGICQLFGVFFYFVYQVFGQENTNSGGKGVANSSSHRLKCCLSRISQECEQW
IKPQFSSSSPSSSLAFTNTVHSLADVTPSSPLNTTSGHVSGISFSLKERCAAVDTVSLVA
RILHKSKSHLQSMLMSRKGSLVEDFFGQLVGSVPDLTEHLHRTTARILLHVNGYVDRIAN
SKWEVKELGVEHNGYVDLMLGEFKHYKTRLAHGGIPQEVQNLLLEYGVEIFAETLVEGLS
RIKRCTDEGRALMSLDIQVLINGLQHFVPTNVKPKLQIVDTFIKAYYLPETEYVHWARAH
PEYTKGQVVGLVTLVATMKGWKRKTRLEVVDKIESAAV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctcttcccattcggctctgtcttgggtaatccgttcctcttcaatggc
ggcgatctaagcgagggtggcttcgagagctctagggttttcttcttacttccactcttg
ttgtcccaaggtgaaggcatggatttatccaaggttggcgaaaagttcctcagctctgtt
aagtccgctacatcccttggactcttaccctcttcttcttcctctgatcgccctgagatt
ccggcacgtgctgctgctgcagctgctgttgctcgtgctttggctggacttcctcctgat
cagaggttaagtatctcttctactgctactgagcttagctcaatatatggtaacagactt
cctcctcaagaagttgaagagcttgaagaaggcttctatgaagaggattttgatccagtg
agacatattttggaaaatgtgccagatgaagatcagagtgagcttgcttattttgagaag
caggcaaccctgaggttagtacagctggatagagtagcagaaagtctgtcacaccatgtt
atggagcatcatgaagtaatggtgaaggggatgaatttggttagagaactggaaaaagat
ttgaagattgcgaatgtcatctgcaagaatggaagaaggaatttgacttcatctatgaat
gaggcttctagagatcttattgtacacactcattccaaaaagaagcaagctcttctggac
atgcttcctatattaaccgatcttcgccatgcaagagttatgcagtcgagtcttgaagac
cttgttgaagaaggaaactattgcaaggcatttcaagttctgtctgagtatttgcagctt
cttgacagtctctctgagttttcagctatccaagagatgacccgtggtgttgaggtttgg
ttaggaagaactcttcataagctggattcacttttgatgggcgtttgtcaagagttcaaa
gaagatagttatataatggtccttgatgcttatgcattaatcggtgatgtctctggtctc
gctgagaagatacaaagcttctttatgcaagaagttatatcagaaacccactcagttcta
aagaccgttgttggggaggataacagttctgccacccaatttagtagacttacatacagc
gatctatgtattcagacaccggaatcaaagtttaggcaatgtctgttgagaacactagct
gtgctatttcagttaatatattcgtaccatcagataatgagtttcactccagaaaagaag
gtagaaaatttgatctcaacaagttctgcaacaactaaaaagattgatttagtgacagac
actgcatgcaacccacaggatggtggtctctcttcaaccatgagttcaacaagcatacct
tcttgtaccatttctgctgaagagtctgttggaagtgaaacctccagtcccctgcagcaa
gcatctaataatgcagtagacgagcctagggattctggagagacagtatctaatggggag
tcaccatggtactatctacgaaaagagagtgctggttttgtttcagaaactctgcagaga
ggacgaagaaatctatggcaactcacaacaagccgtgtgtcagttctgctctcatcccca
gctgcttcttcaacaagtatacatcagttccttaaaaactatgaagacctgagcgtcttt
atccttgctggggaagcgttctgtggatttgaagttgttgattttagggagaagctaaag
gctgtatgcgaaaattatttcactgcgtttcataggcaaagcatgcatgcgcttaaaatg
gtcctggagaaggagacatggacgagattgccacctgatactgtgcaagctatcaatttt
gctggtcttgtgggggatggggctccccttatcatttcttcccgaagtgcctctggttct
tctagatttcctctctcaactgatccgagtgggaacaggagtggtggattctcatattgg
ctgaaaagtggaaaccctttctcagcaaagttaacgtactatagagaagatcaagactac
tcttcagacagtggagctgcctctgaagatcaagactactcctcggacgttgtgaattcc
aaggtaagaaataaaaaaagcattaacggaggtagtcctgcttcaggagatgaaaatgaa
gaccttcatgctgactatattgatgaggatagtcagcttccaagacgaagttttacacgc
agtatatcaaggacttctttttcacatttgagtactaatgatgatttgaaagctcaaaca
ggatcgtctctgtgccttctaagatcaatggataagtatgcgaggcttatgcagaaacta
gaacttgttaatgtcgaattctttaagggaatatgccaattgtttggggtctttttctat
ttcgtgtatcaagtttttggtcaagagaataccaattcaggtggaaaaggagttgccaac
tcttccagccatcgtttgaaatgctgcttatcccggatatcacaggagtgcgagcaatgg
ataaaacctcagttttcatcatcatcaccatcttcttcacttgcctttaccaacacagtt
catagtcttgcggacgtgactccatcaagtcccttaaatacaacctctggtcacgtatca
ggcatatcttttagtctcaaggaacgatgtgctgcagtggacactgtttctcttgttgct
cggatattgcataaatcaaagtctcatctccaatcgatgcttatgtcaagaaaaggttct
ttggttgaagacttctttggtcaactggttggttcagtacctgatctgacagagcactta
cacaggacaactgcgaggatcctgctgcatgttaatggatatgtcgaccggattgctaat
tctaaatgggaagtcaaggagcttggagtggagcataatgggtatgttgatttgatgctt
ggggaattcaaacactacaaaacaaggcttgctcacggaggcattccacaggaggtccaa
aacctcctactggaatatggagttgaaatatttgcggagacgctggtggaaggtttatct
agaataaaaagatgcacagatgaaggacgtgctctcatgtcattagatattcaggtctta
ataaacggtttacaacactttgtgccaacaaatgtgaaaccgaagttacagatagtggac
acatttatcaaggcatactatctaccagagactgaatatgtccactgggcaagggctcat
ccggaatatacaaaaggacaggtcgtaggacttgtgactttagtagccaccatgaaaggc
tggaagaggaaaacgcggttagaagttgtggataagattgaatcagctgctgtgtag
DBGET
integrated database retrieval system
