Raphanus sativus (radish): 108845569
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Entry
108845569 CDS
T06014
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108845569
03410 Base excision repair
108845569
03420 Nucleotide excision repair
108845569
03430 Mismatch repair
108845569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108845569
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108845569
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108845569
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108845569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
AAA_22
RCF1-5-like_lid
AAA_30
AAA_19
AAA_18
AAA_assoc_2
Rad17
nSTAND3
Gp44_lid
RuvB_N
AAA_5
Sigma54_activ_2
AAA_14
Fibrinogen_aC
AAA_17
Zeta_toxin
AAA_16
AAA_28
NTPase_1
BRCT_2
Myosin_head
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
108845569
NCBI-ProteinID:
XP_056852009
UniProt:
A0A9W3CKB8
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MSNIRKWFVKPHDDKGNGNAAEETAPLKSEQASEDLETAARRKTSKYFAKEKAKAKEVGA
LPAKRKLKTDSDDLGKPRPGEDIKVDGDDFEVPSSRKTPGSIPSKKLKCGSGRGIASKTV
VNDEDGDDGEDAQEKDTLRSGGRGRGGRAASGGSTGGRGGRGGGRGGFMNFGERKDPPHK
GQKEVPEGSPDCLAGLTLVISGTLDSLEREEAEDLIKRHGGRVTGAVSKKTTYLLCDEDI
GGRKSEKAKELGTKFLTEDGLFDMIRSSKPVQKSMPERTNKGTEKVSAQPKKSPQKEETR
GKPLAKISPNKVPPRPSPAKGLKKIVQSSLPWTEKYRPKLPNEIVGNQSMVTELHNWLSH
WHDQSRDTGSNFFFSISKGKGKKYNDAGVKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVE
VNASDSRGKANSNIAKGIGGSIANTVKELVNNEALASNIDRSKHPKTVLIMDEVDGMSAG
DRGGVADLIASIKMSKIPIICICNDRYSQKLKSLANYCLPLNFRKPTKQQMAKRLTHIAK
AEGLEVNDIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDISPF
TAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLIQENYLNYRPSSAGKDEAKRMELLARA
AESVADGDIINVQIRRHRQWQLSPSCCVASSILPASLLHGSREVLEQGESTFNRFGGWLG
KNSTAGKNTRLLEELHVHVLASRESSSGRETLRVDYLPLLLNRLTSPLKTLPKDEAVSEV
VAFMNTYSISQEDYDTIMELAKFKGRTNPLEGVPPAVKTALTRKYKETNKTRMVRAADMV
QLPGVKKAPKKRIAAMLEPTVESLRGEDGEQVAENEEDKESDAEDSEEATNGEKLESNLK
NLNARGIRVEVDLKVSGSKKTTGRGRGKDYIIELQGSELKWI
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatattcgaaagtggtttgtgaaaccccatgatgacaagggtaatggaaatgct
gcggaggagactgcacccttaaaatctgagcaggctagtgaagacctggaaactgctgct
aggagaaaaacgagcaagtattttgctaaagaaaaagcaaaagctaaagaggtgggagca
cttcctgccaagaggaaacttaagactgattctgatgatttaggcaagccccgtccagga
gaggatattaaggttgatggtgatgattttgaggtgcctagttcgaggaagactcctggt
agcattcccagcaagaaactaaagtgtgggtcaggtagaggaatcgcaagtaaaactgtt
gttaatgacgaggatggtgatgatggtgaagatgcccaagaaaaggatactcttagatca
ggcggaagaggccgtggaggtagagctgcatcagggggctcaactggtggacgaggaggt
agaggtggagggcgaggtgggtttatgaattttggtgaaaggaaagacccacctcataaa
ggacaaaaggaagttcctgaaggcagccctgattgcttagctggattgacattggtaatt
agtggaacacttgatagtttagaaagagaagaagcagaagatctgataaagcgacatggt
ggccgtgtcacaggcgccgttagcaagaaaacgacgtaccttttgtgtgatgaagacata
ggcggaagaaaatccgaaaaagctaaggagttgggcactaagttccttacagaggatggc
ctatttgacatgatccgttcctctaaacccgtacaaaagtctatgcctgagaggacaaac
aaaggcactgaaaaagtcagtgcacagccgaagaaaagtcctcaaaaagaagagacaaga
ggcaaacctttagcaaaaatttcgcccaacaaggttcccccacgtccttccccggcaaag
ggattaaagaaaattgtccagtcttccttgccatggacggaaaagtacagaccgaagctt
ccaaatgagattgttgggaatcagtcaatggttactgagcttcacaactggctgtcccat
tggcatgatcaatctagggatactggctcaaattttttcttttctatatcaaaaggaaag
gggaagaaatataatgatgctggtgtcaagaaggcagtacttttgagcggaacacctggt
attggaaaaacaacatcagcaaaattagttagtcagatgcttggtttccaggcagttgag
gttaatgctagtgacagtcgtggaaaggcaaactcgaatatcgccaaaggaattggtggt
agcattgcaaatactgtaaaagaacttgtcaataacgaagcccttgcttctaacattgat
aggtcaaagcacccgaagactgttctaatcatggatgaagttgatggaatgtctgcaggc
gacagaggaggtgttgccgaccttattgctagcattaaaatgtcaaagattcctattatt
tgcatttgtaatgaccgatacagtcagaaactgaagagtttagcaaactactgtctgccc
ctcaatttccggaagcccacgaaacagcagatggcaaaaaggctgacgcatattgctaag
gcagaaggccttgaagttaatgatattgccctggaggaactcgctgagagagtgaatggt
gacatacggctagccctgaatcagctccagtatatgagcctgtcgatgtcagtcatcaag
tatgatgatatcaggcagcgcctgctaagcagtgcgaaggatgaagatatttcccctttc
acagctgttgacaagctgtttggttataatggtgggaagctgagaatggatgaacggatt
gacctaagcatgagtgattttgatttggttccccttcttatacaggaaaactatctgaat
tataggccgagttccgccggcaaagatgaggcaaaaagaatggagttacttgcccgtgct
gctgagtctgttgcggatggagatattatcaacgtgcagattcggagacataggcaatgg
caactctctccatcttgctgtgttgcttcttctattctcccagcttccttgttgcatgga
tcaagggaggtgctcgaacagggagaaagtactttcaatagattcggtgggtggcttggc
aagaattctactgcggggaaaaatacaaggttgctggaggaactgcatgttcatgtcctt
gcttcccgtgaatccagctctggaagggagactcttcgtgttgattatcttccccttctc
ttgaatcgcttgacgagtccactgaagacactgcctaaggatgaagctgtttcagaagtt
gttgcgttcatgaacacctactctataagccaggaagactatgatactattatggagtta
gcaaaatttaagggacgtacaaatccattggaaggtgttccacctgctgttaagacagct
ttgactagaaaatataaagagacaaataaaaccagaatggtacgtgctgccgacatggtg
cagcttccgggtgtgaagaaggcaccgaagaaacgaatagctgcaatgcttgaacccact
gttgaaagtttaagaggtgaagatggcgagcaggtagcagaaaatgaagaagataaagaa
tcagacgctgaagactcagaagaagcaactaatggagaaaagctggagtcgaatctaaaa
aatctgaatgcaagagggatccgagttgaggtggatttgaaagtatcaggttcaaaaaag
acaactggcagaggcagaggcaaagactatataattgagttgcagggatccgagttgaag
tggatttga
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integrated database retrieval system
