Raphanus sativus (radish): 108845743
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Entry
108845743 CDS
T06014
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2
KO
K08775
breast cancer 2 susceptibility protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108845743
03460 Fanconi anemia pathway
108845743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108845743
03036 Chromosome and associated proteins [BR:
rsz03036
]
108845743
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108845743
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108845743
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108845743
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108845743
FA (Fanconi anemia) pathway
Downstream FA components
108845743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
108845743
NCBI-ProteinID:
XP_018474420
UniProt:
A0A6J0MPL6
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Position
3:complement(28345804..28354091)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSTWRLFRDSSGDCFRWEVAGRILQSDSEDSALETTAPLPSMNDLLLQGWSKLTQGDEAM
FRTGLGNSAKSVLADEHHHQPDLYNTGCSNLQVDSASTFPMFRTASGHSVPFKDSSIAKA
LSILGASSDNVPLRESGVGDPNSFFQTASNKKVIVSSAALSRANALLGLEDDAFDGFNHL
KPSNSSHQKRGCSEFKTHPTGGLHHHSETPGQYEGHVSRKISQNLYPPAMLPPTNFQTAG
GKTLSVSAQALKRARNLLGDPDSGTFFDDVAAGDQFATPQKVQRLDDMDAINSRNANTGY
KGKTSNKHSATSFVSPLRSSSKQFTSVKLEDLASGGYLIKKFDAAVDETDCALNITKLAT
NGLLNNMPLASNMAVNNAKANGFTPIAKQFGQPLVDITNRCDTAYANNKQDNTQKKRLGK
TIFVSPFKRPRNSSFKTPLKKNAQHALSGLSIVSSDTLNSKKVLSTRYPDRSPRVYIKDY
FRMHPTVTIKMNYVPDHVRRIKSSNADKYVFCDKSSSNMVGAETFFQMLAESGASLQQAS
RKWVINHYRWIVWKLACYETCYPVICRGNFLTITNVLEELKYRYDREVNHGHCSAIKRIL
SGDAPASSMMVLYISAINPKTDNDSQEALGSGYGSNVKVELSDGWYSMNAALDVNLTKQL
NAGKLFVGQKLRILGAGLSGWATPTSPLEAGISNTICLLLNINGTYRAHWADRLGFCKEV
CVPLAFNCIKGNGGPVPKTLAGITRIYPILYKERLGEKKSIVRSERMESRMIQLHNQRRS
DLVEGLMCEYERAVNGVHSQNDTDSEEGAKVFKLLKTASEPELLMAEMSLEQLTSFTTYK
SKFEMENSVAKALEDAGLGERDVTPFMRIRLVGLTSLSYEGKHNPKEGIVTIWNPTERQR
TELTEGKIYVVKGLVPMISDSETLYLHARGSSSRWEPLSPKASSSFQPFFKPRKPISLTD
FGGIPLSSEFDIAAYVVYVGNVYTDVEQKKQWVFVTDGSTQHSRSGEISNSLLAISFSTP
SKDDLPTPHISQSLVGSVVGFCNLIKRAKDAKNDMWVGEATENSVYSINAEASYSSHLKT
SSSHIQTWAKLSSFNSVIHKLRQRVLFIIGASTCSR
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggaggttatttcgcgattcaagcggcgattgtttccgatgggaagtcgca
ggccggattctccaatccgactcagaagattctgctcttgaaaccacagctcctctacca
tctatgaacgatctcttgctccaaggatggtcgaagcttacgcagggggatgaagcgatg
ttcaggactgggctggggaattctgccaaatctgttttagcagatgaacatcatcatcaa
ccagatctgtacaacacaggatgctccaatctccaagtggattcagcttcaactttccct
atgttcaggaccgcctcagggcattctgtcccattcaaagactcttccattgccaaagct
ctttctattcttggggctagctcagacaacgttcctctcagggagagtggggttggtgat
cccaactcttttttccagactgcttctaacaagaaggttattgtatcttctgccgctctg
tcaagagccaacgcattgttagggctagaagatgatgcttttgatggatttaaccacttg
aagccgtccaattcttcccaccagaaacgtgggtgctctgagtttaaaactcatcctaca
ggagggctccaccatcattcagaaactccaggacaatacgagggtcatgtatctcggaag
atatcacaaaatttatatccacctgcaatgctgcctccaacaaattttcagactgctggt
gggaaaacgttgtcagtgtcagcccaggcattgaaacgtgccagaaaccttctcggagac
cctgactcagggactttctttgatgatgtagcggcaggtgatcagtttgctacaccacag
aaagttcaaaggttagatgatatggatgctataaacagtagaaacgccaacactggttat
aaaggaaagacaagcaacaagcattcggcaactagttttgtatctcctcttcggtcatct
tcaaagcaattcacatcagtcaaactggaggatctagcttcagggggttatttgatcaag
aaattcgatgcggctgttgatgagacagactgtgctctgaatatcactaaacttgctaca
aatggactattaaataacatgcctttagcatcaaatatggcagtgaataatgccaaggca
aacggtttcactccaatagctaaacaatttggccagccacttgttgatataacaaatcgc
tgcgatacagcttatgcaaacaataaacaagacaatacccaaaagaaaagactgggaaag
acaatcttcgtttctccttttaaaaggccaaggaattcctcctttaagactcctttaaag
aaaaatgctcagcatgctttaagtggtttgtctatcgtatcttctgatacacttaattcc
aaaaaggtgctttctacaagatatccagacaggtctccaagagtatatatcaaggattat
tttcgaatgcatccaacagttacaattaagatgaactatgtgccagaccatgtcagaaga
atcaaatcaagtaatgcagataaatatgtattctgtgataagtcttcctcaaatatggtt
ggggctgaaacttttttccaaatgttggctgagtctggtgcttccctacaacaagcatct
agaaagtgggtcattaatcactacagatggatcgtctggaaacttgcatgctacgagaca
tgctacccagttatatgcagaggaaattttctgactatcaccaatgttcttgaagaactg
aaatacagatatgatcgagaagtcaatcatggtcactgctctgcaatcaagaggattctg
agtggtgacgctccagcttcttcaatgatggtgctctacatatcagctataaatccaaag
acggataacgattctcaggaagcacttggttctggatatggcagcaatgtgaaagtagag
ctcagtgatgggtggtactccatgaatgctgccctggatgttaacctgacaaagcagctg
aatgctggaaaattgtttgttggacagaagcttcgaatccttggggcaggactttctggc
tgggctacaccaacatcacctcttgaggcagggatttcaaatacgatttgtttgctgttg
aatattaatgggacgtacagagctcactgggcagaccgactaggattctgtaaagaagta
tgtgttcctctggccttcaactgtatcaagggcaatgggggtccagtgcctaaaacgtta
gctggaatcacacgaatataccctatcctgtacaaggaaaggttaggtgaaaagaagtca
attgttcgatcagagagaatggaaagtagaatgatccagctgcataaccagaggcgctca
gatcttgttgagggtcttatgtgtgagtacgagagagcagtaaatggtgtccacagccag
aacgacactgacagtgaggaaggagccaaggtctttaagctgttaaagactgcttctgaa
cctgaactcctaatggcagaaatgagtctggagcagttgacatctttcactacatataaa
tcaaaatttgagatggaaaattcagtggcaaaagctctggaagacgctggcttaggtgaa
agggatgtcacgccattcatgaggattaggcttgttggactgacgagcttaagttatgaa
ggaaaacataatccaaaagaaggcatagtaacaatctggaatccaacggagagacagaga
accgagttgacagaggggaaaatatacgtagtgaaagggctagtaccaatgatatcagat
tcagaaacactttacttacatgccagagggtctagctcaagatgggagcctttgtctcca
aaagcttcttcaagttttcagccctttttcaaaccccgtaaacccatttctttgaccgat
tttggtggaattcctctttcaagtgaatttgatatcgctgcgtacgttgtatatgttgga
aatgtatacacggatgttgagcaaaagaagcagtgggtgtttgtgacagatggatctact
caacactcacgttcaggggaaatctcaaacagtcttcttgctataagcttcagtacccca
tccaaggatgacttgcccactccccacatcagccaaagtcttgtcggatcagtggtagga
ttttgcaacctaataaaaagagcaaaggatgcgaaaaacgatatgtgggtgggagaggca
acagagaactcagtgtattccataaacgcagaagcttcttactcctctcacctcaaaacc
agcagttcccatatccaaacatgggctaagctctcttctttcaactcagtgatccataaa
cttaggcagagagttctatttataatcggtgcgtctacatgctcaaggtga
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