Raphanus sativus (radish): 108845903
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Entry
108845903 CDS
T06014
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108845903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108845903
Transporters [BR:
rsz02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108845903
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108845903
NCBI-ProteinID:
XP_018474605
UniProt:
A0A6J0MQ57
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Position
6:complement(19674549..19677612)
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AA seq
517 aa
AA seq
DB search
MEVKKPEFTFEDDEDSSKYENDSGTDQSDVGDLPGDDDNGDDTFISQIQWPQSFRETTDS
YTIAASPIFGSLRSNPSFYRQSRSNLDVESKAPLLPERNEESDKASVTQSVWSHKGSFAE
DLPIGGYGCSVTQTIFNGINVMAGVGLLSTPYTVKEAGWASMVILLLFAVICCYTATLMK
DCFETKPGIITYPDIGEAAFGKYGRILICVLLYTELYSYCVEFIILEGDNLTGLFPGTSI
DWLGIKIDSIHLFGIITALIILPTVWLKDLSIISYLSAGGVIATVLVAVSTFFLGTTGGI
GFNHTSNAVKWNGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFNKAVITCFILCVLIYG
GVAIMGYLMFGEATLSQITLNMPKDSLFSKVAQWTTVVSPFTKYALLMNPLARGIEELLP
ERIAENIWCFLLLRTALVASSVCSAFLIPFFGLVMALIGSLLSILVAIIMPALCFIRIMG
NKATRTQMILSSIIVVIGLVSGTLGTYSSVSKIMRNY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaagaaacccgagttcacgttcgaagacgatgaagacagcagtaagtacgag
aacgacagtggcactgatcaaagcgacgtcggcgatcttcctggtgacgatgacaatggc
gatgacactttcatctcccaaattcagtggcctcagagctttagggagacgactgattct
tacacgattgctgcatcaccaatcttcgggtctctcaggagcaatcctagtttctataga
cagagcagaagtaatcttgatgttgagtcaaaggctcctttgcttcctgagagaaatgaa
gaatccgacaaagcctcagttacacaatcagtttggtctcataaaggctcatttgcggaa
gacttgcccattggtggctatggctgcagcgtcactcaaaccattttcaatgggattaat
gtgatggctggagttggacttctctcaacaccttacacagtgaaagaagctggatgggca
agtatggtgattcttctcttatttgctgttatatgctgttacactgctactttaatgaaa
gattgtttcgagaccaagcctggcattatcacttaccctgacattggagaagctgctttt
gggaagtatggtcgtattcttatctgtgtgctattgtacactgaactatattcatattgt
gttgagttcatcatcttagagggggataaccttaccgggcttttccctggtacatccatc
gattggctcgggatcaagatcgactctatacatttgtttggaatcataactgctctcatc
attctcccaactgtttggttgaaagatcttagcatcatttcctacctctcagctggtgga
gttattgcaactgttttggtagcagtgagcacgtttttccttgggacaacgggcggaatc
gggtttaatcacactagtaatgctgtgaaatggaatgggataccgtttgctattggtatc
tatggattttgttattcaggccactctgtgttcccaaatatataccaatccatggctgat
aaaaccaagttcaacaaggcagtgatcacatgtttcattttatgtgttttgatatatgga
ggagttgcaatcatgggttatctcatgtttggtgaggccaccttgtctcagattacacta
aacatgccaaaggactcattattttcgaaagtggctcaatggacaacggttgtgagtccg
tttacaaaatacgctctcttgatgaatccactagcgaggggtatagaagagctcttacct
gaaagaatcgcagagaatatatggtgttttcttcttctaagaacagcacttgttgcttct
tccgtttgttctgctttccttatcccattttttggtcttgtgatggctctgataggatct
cttctcagtatacttgtggcaataataatgccagctctatgcttcataaggataatgggc
aacaaagctacaagaacacagatgattctgagttcgataattgtggtgattgggttagta
agtgggaccttggggacatactcttcagtttcaaagatcatgaggaactattaa
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