Raphanus sativus (radish): 108846120
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Entry
108846120 CDS
T06014
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108846120
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
108846120
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108846120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransf_23
PRMT5
DREV
Methyltransf_2
MTS
PPS_PS
Methyltransf_4
PCMT
Methyltransf_28
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
108846120
NCBI-ProteinID:
XP_018474833
UniProt:
A0A6J0MSG6
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All DBs
Position
3:10505376..10506838
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AA seq
344 aa
AA seq
DB search
MAGGKIRKEKPRATSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPG
TGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPYSNRLKVIQGDVLKTELPRFDICV
ANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVS
HLLKVGKNNFRPPPKVDSSVVRIEPRKPQPQVNKKEWDGFLRVCFIRKNKTLGSIFRQKS
VLLMLEKNFKTLQAVLASLNGSNGEAAGMDLGDQSMGMEDDDHEMDGDDDDDVEMDEGQG
GEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctggagggaagataaggaaggagaagccaagggcaacgtcaaaccattaccaagga
ggaatctccttccacaaatcgaaaggacagcacatcctcaagaaccctctcctcgttgac
tcaatcgttcagaaagcaggtatcaagagcaccgatgtgatcctcgagatcggtccaggt
actggtaacttgaccaagaagcttctagaagctggtaaagaagtcatcgctgtcgaactc
gattctcgtatggttctcgagcttcagcgccgtttccaaggaactccttattctaaccgc
ttgaaggtaatccaaggtgatgtgttaaagacggagcttcctcggtttgacatatgcgtg
gccaacattccgtatcagatatcatctcctctaacgttcaagcttctcttccacccaact
agcttcaggtgcgctgtgatcatgtaccagagagagttcgccatgagactcgttgctcaa
cctggagacaacctttactgtcgtctatcagtcaacactcagctctatgccagagtctcc
cacctcctcaaagtcggcaagaacaacttccgaccacctccgaaggtggattcttctgtt
gttaggatcgaaccgaggaagccacagcctcaggtgaacaagaaggagtgggatggtttc
ttgagagtctgtttcatcagaaagaacaaaactttgggatccattttcaggcaaaagtct
gtgcttttgatgctggagaagaacttcaagactcttcaggcggtactagcttcgttgaat
ggctcgaacggagaagctgcgggcatggatcttggtgaccagagcatgggaatggaagat
gatgatcacgaaatggatggtgatgatgatgatgatgtggagatggatgaagggcaagga
ggagagtttaaggagaaggttatgaatgtgttgaaagaaggtgggttcgaggagaagagg
tcgtcgaagctatcacaacaagagtttttgtatcttctctcgttattcaacaagtcgggt
attcacttctcatag
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