Raphanus sativus (radish): 108846145
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Entry
108846145 CDS
T06014
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108846145
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rsz00535
]
108846145
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108846145
Meiosis-specific proteins
Cohesin complex and associated proteins
108846145
Proteoglycans [BR:
rsz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
108846145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
CCPG1_N
CENP-F_leu_zip
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
108846145
NCBI-ProteinID:
XP_018474869
UniProt:
A0A6J0MRU5
LinkDB
All DBs
Position
3:10176004..10183499
Genome browser
AA seq
1206 aa
AA seq
DB search
MFIKMVIIEGFKSYKEQTATEDFSRKVNCVVGANGSGKSNFFQAIRFVLSDIFQNLRNED
RKALLHEGASHQVGYAFVEIVFDNSDYRIPVDKEEIRLRRTIGLKKDEYFMDGKHITKNE
VMDLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLGLLKEIGGTRVYEERRHESLKIMQ
VTGIKRNQIIQVVQYLDGRLKDLDEEKEELRKYQQLDKQRKSLEYTIYDKELHDTREKLE
QVEVERTKASEESTKMYDRVEKAQDEYKSLDESLTGLKKELQTMNKKKETVEARKTEAIN
NKTKLELDENDFKERIAGNIQSKNDALEQLSVVEREMQDSLKELEAINPLYESQVDKEKQ
TTKRIMELEKKLNILYQKQGRATQFSNKATRDKWLRKEIKDLKPVLDSNIVQEQKLQNEI
FGLNVDLRERDAHIKNHEVEISELDTHISNSHEKFNIKKRERDEEHRKRREKWGEESELS
SETEKLKTDLERAKKTLDHATPGDVRRGLSTIKRICSEHKINGVFGPLVELVDCEEKFFT
AVEVTAGNSLFHVVVENDNISTEIIKHLNSRKGGRVTFIPLNRVKTPPHVNYPQSSDAIP
LLRRLKFDSKFAPAFAQVFGRTIVCCDLNVATRIAKSDGLDCITLEGDQVSRKGGMTGGF
YDHRRSKLRFMNTIIQNTKSIDTKGKVLEDVRRQLQVIDQKITQLVTEQQRLEADWTHSK
LQVEQLKQEIASVTKQKHDIHKSLEHKEKSLGDVRTQMEQLRSSMAMKEAEMATELVDRL
TPEESEELSRLNPKIKDLKDKLIAIKTDRIERGTKKTELETNLSTNLKRRMNELHATIAS
IEDDSLPSSAGLETQELYDAKLLVEELTNELESLCRSIDEKTKQVKRIKDEKAKLKTLQD
DCEMKVQDANKKLEELFSHRNTLLAKQEENRKKIMGMGPLSSEAFDTYKQKNIKELQKML
HLCSEQLQQFSHVNKKALDQYVNFTEQREELQKRKAELDAGDEKIKELITVLDQQKDESI
ERTYKMVALNFRGIFSQLVQGGHGDLVMMKKTNKKDRDHDADDDVCGEAATEGRVEKYDG
VTVKVSFTGQGETRSMKQLSGGQKTVVALALIFAIQKCDPAPFYLFDEIDAALDTQYRTA
VGNMIRGLADDSVSTQFITTTFRPELVKVADKIYGVFYENRASIVKVISKDQALNFIQNE
YQSHDT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaagatggttataatcgaaggtttcaagagttacaaagagcaaactgctact
gaggatttcagccgcaaagttaactgtgttgttggggcaaatgggtctgggaaaagcaac
tttttccaagcaattcgttttgtactgagtgacatcttccaaaatctgaggaatgaagat
aggaaggcgttactccatgaaggtgctagtcatcaagttggatatgcgttcgtggagata
gtctttgataattctgattaccgtatccctgttgataaagaagagattcgcttgcgccga
actattggtctgaaaaaggatgaatatttcatggacgggaaacacattacaaaaaatgaa
gttatggatttactggagagtgctggattttctcgttctaatccgtactatgttgttcaa
caaggaaagatagcctcgttgacactgatgaaagattcagaacggctgggtctactaaaa
gagattggtggtacccgtgtttatgaggagagacgccatgagagtttgaaaattatgcag
gttacagggatcaaacggaatcaaatcatccaagttgtccaatacttggatggcagacta
aaggatttggacgaagagaaagaagaacttagaaaatatcaacaacttgataagcagaga
aaatcacttgaatacaccatttatgacaaagagcttcatgatactagggagaaacttgaa
caggttgaagttgaaagaactaaagcatctgaagagtctacaaaaatgtatgaccgtgtt
gagaaggcccaggacgagtacaagagcttagatgagtcgctgacaggactgaaaaaagag
cttcagacaatgaacaagaagaaagaaactgttgaagcacgaaaaactgaagctataaat
aataagacaaaactggagcttgatgagaatgatttcaaggaacggattgctggaaatatc
cagtctaagaatgatgcacttgagcaacttagtgtggtggaaagagaaatgcaggattct
ttgaaggaactagaggcgattaatcccttgtatgagagtcaagttgacaaggagaagcag
acgaccaaaagaataatggagctggagaagaagcttaatattctttatcagaaacaggga
cgtgcaactcagttctcaaataaggctactcgagacaaatggctccggaaagaaattaaa
gatctcaagcctgtactagactcaaatatagttcaagagcaaaaacttcagaatgaaatt
tttggcctcaatgttgatttaagggagcgtgatgcacacatcaagaaccatgaagttgaa
attagtgaactggatactcatatttccaattcccatgaaaaattcaatattaaaaagagg
gagagggatgaagagcatagaaaaagaagggaaaaatggggagaagaaagtgaactatct
tctgaaactgagaagttgaaaacggatcttgaaagggcaaagaaaactcttgatcatgca
actccaggagatgtaaggcgaggactgagcactatcaaacggatttgctctgagcataag
ataaatggagtttttggtccacttgttgagctggttgattgcgaggaaaagtttttcact
gcagttgaagtcactgctggaaacagcctatttcacgtagtagttgagaatgacaatatt
tcaacagagataatcaaacacctgaattctcgaaagggtggacgtgtgaccttcatacct
ctgaatcgggtaaagacgccgcctcacgtaaactatccacaaagttctgatgcaatacca
ctgctgagaagattgaagttcgactcaaaatttgcaccagcatttgcccaggtttttggt
agaacaatagtatgttgtgatctgaatgtagcaacaagaattgctaagagcgatggcttg
gattgcataactttggaaggtgaccaggtgagcagaaagggtggtatgaccggcggattt
tatgaccacaggcggtcaaaattgagattcatgaataccataatacaaaatacaaagtct
attgatacgaaggggaaggtgttggaggatgttagaagacagctgcaagtgatagatcag
aagatcacacagcttgttactgagcagcagagacttgaggcagactggacgcatagcaaa
ttacaggtggagcaactgaagcaagagatagctagcgtgactaagcagaaacatgatata
cataaatcccttgaacataaggagaaatcactaggtgacgttagaacacaaatggagcag
ttaagatctagcatggccatgaaggaagctgaaatggccacggaacttgtggatcgccta
accccagaagaaagcgaagaattatcacgattaaacccaaaaattaaggatcttaaggac
aaacttattgcaatcaagacagatcggattgagagggggacaaaaaaaacagagttggag
actaatttgtctaccaacttaaagaggagaatgaatgagttacatgctaccatagcttcc
atcgaggatgatagtttgcctagttcagctggcttagaaacacaagaactttatgatgca
aaactattggttgaagagctcacaaacgagctcgaaagtctctgtcgaagcatagatgag
aagactaagcaggtcaagagaattaaagatgagaaagcaaagttaaagacattgcaagat
gactgcgagatgaaagtgcaagatgcaaataaaaagttggaggaactattcagccatcgt
aacacactccttgctaagcaggaagagaataggaagaagattatgggaatgggtccattg
tcatctgaagcttttgacacgtataaacaaaaaaatataaaggagctacagaagatgcta
cacctgtgcagtgaacagctgcaacagttcagccatgttaacaagaaagcgcttgatcaa
tatgtaaatttcacagaacagcgagaagaacttcagaaaaggaaagctgagcttgatgca
ggagatgagaaaattaaagaactgattacagttctggatcagcagaaagacgaatctata
gaacgtacttacaaaatggttgcacttaacttccggggtatattctctcagcttgtgcaa
ggtggacatggtgaccttgtcatgatgaagaagacgaataaaaaggaccgtgatcatgat
gctgacgatgatgtgtgtggtgaagctgctacagagggaagggttgagaaatacgatggt
gtaacagtgaaggtgtcgtttactggtcaaggggagacacgatcaatgaaacaattgtcg
ggaggacaaaagaccgttgttgctctcgcattaatatttgccatccagaaatgcgatcct
gcaccattctatctcttcgatgagattgatgcggcacttgatactcaatatcgaactgct
gtcggcaacatgattcgtggtttagctgatgacagcgtaagtacgcagttcataaccacc
actttccgtccggagctagtaaaagttgcggataagatatatggagtgttttatgagaat
agagcgagtattgtgaaagttatttcaaaggaccaggcgttgaacttcatccaaaatgaa
tatcagtcccatgatacttga
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integrated database retrieval system
