Raphanus sativus (radish): 108846174
Help
Entry
108846174 CDS
T06014
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108846174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108846174
NCBI-ProteinID:
XP_018474901
UniProt:
A0A6J0MTL1
A0A9W3DA84
LinkDB
All DBs
Position
3:16033490..16036140
Genome browser
AA seq
590 aa
AA seq
DB search
MYYSIYNKTLKSRCIKRLKPKMNLKSELNDLEELTSNAKQIQDDMLEEILRVSANTEYLR
PFLHGSSHKELFKKNVPVVTYEDVKPYIERVANGEPSDVISGEPITHFFRSSGTTGGKQK
IFPVNNKYYQKRIFSEDLRCSILSKHINGVVDGKVIAFLNTRKLSRTPSGLPVGPVITSF
LVSEYFKNWSSKRYTSPDEVISCTDSKQSTYCHFLCALVQREEVVSIFVPFACALVQAIK
FLETHWKDLCNDIRSGHVSEWITDLGCRDSVSVMLGVPNPELADQIERECCRQTSWEGII
TRLWPNIKFIHSVVTGQMSQFIPVLEFYSNKLPLVSMSYSASETLLGINVNPLCKPQDVS
YTFLPNMSYFEFLPLDEGNNAEVVDLVDVKLGHFYDPLVTNHFGLYRYRMGDILQVTGFY
NKTPQFRFVRRKDTVISVHVEKTTEEDIANAMNRVTAVLDSEGLILMGFTCKPDISTFPG
HYVFYLELKAKNSDSIVKLDNSVMVKCCCVMEKSFNALYRKFRREYESIGALEIRVTKQG
RFDSLMEYFISQGASASQYKTPLCIKSPQGLAILEDRVIAQFFSDKSPPL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtattactctatatataataaaaccctgaaatctaggtgcatcaagagactaaaacca
aaaatgaatctaaaatcagagctgaatgatctagaggaattgacctcaaatgcgaagcaa
atacaagacgatatgttggaagagatactaagagttagtgcgaacacagagtatcttcga
ccctttcttcatgggagctctcataaagagcttttcaagaagaacgtaccggtggtgacc
tatgaagatgttaagccttatattgagcgcgtggctaatggagaaccctcagatgtcatt
tcgggcgaacctattactcattttttcagaagttctggaactacgggaggaaaacaaaag
atcttccctgttaacaacaagtattatcagaagaggatatttagcgaagatctacgctgc
tctattttatccaagcatatcaatggcgtcgtggacggaaaggtgatagcatttcttaac
actagaaaattgtccagaactccctctggtctacctgttggtcctgtaattacgagcttc
ctagtgagcgaatatttcaagaactggtcatccaaacgttacaccagccctgacgaagtc
atatcatgtactgacagcaaacagagtacttactgtcattttctttgtgctcttgtccag
agagaggaggttgtgagtatttttgttccatttgcttgtgcgttagtccaagcaatcaaa
tttcttgaaactcactggaaagacttgtgtaacgatattcgatctggtcatgttagcgag
tggattaccgaccttggttgcagagactctgtctccgtcatgcttggagtaccaaatcct
gaattagcagatcagattgaacgtgaatgctgtcgtcagacatcatgggaaggtatcatc
acacgtctatggcctaacatcaaattcattcatagcgtagttacaggacagatgagtcag
ttcattccagttttggagttctactccaacaaattgcctctcgtctccatgagctattct
gcttctgaaacattgttagggatcaatgtgaatcccctatgcaaaccacaagacgtttct
tatacatttttgcccaacatgtcctacttcgagttcctacctcttgatgaaggaaacaat
gctgaagtagttgatctcgtggacgtcaagttaggtcacttttatgaccccttggtcaca
aatcatttcgggttatacagatatagaatgggagatattctacaggtgactggattttac
aataaaacacctcagtttagatttgtacgcagaaaggatacggttataagcgtccatgtg
gagaaaacaacagaagaagatatagcaaatgcgatgaatcgtgtgacagcagtacttgac
tctgaaggtttaatattgatgggattcacatgcaaacctgatatctccaccttcccaggt
cattatgttttttacttggagctcaaagccaaaaactctgatagcattgttaagcttgat
aacagtgtaatggtcaagtgttgctgtgtaatggagaaatcatttaatgctctctataga
aaatttaggagagagtatgagagcatcggagcgctagagataagggtgacgaagcaagga
aggtttgattctctcatggaatatttcatctcccagggtgcttctgcgtctcagtacaag
acaccactatgcataaaatcccctcaaggtttagcaattcttgaagacagagttattgct
cagtttttcagtgacaaatcccctcctctctga
DBGET
integrated database retrieval system
