Raphanus sativus (radish): 108846584
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Entry
108846584 CDS
T06014
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108846584
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108846584
NCBI-ProteinID:
XP_018475307
UniProt:
A0A6J0MS79
A0A9W3CIF0
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Position
3:20842140..20844155
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AA seq
580 aa
AA seq
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MSMWSDLSDKLDEKVLEDLTSNVKQIQDDVLREILTLANTECLRPFLNGSSDKDAFKKNV
PVTTYDDVKLFIDRVANGEPFDVISGTPITGFSLSSGTSGGIRKRFPCTKEYLENLNFIY
CYRSLVISKHFDGLEHGKGMVFNFCVPEHITPSGLPVSAATTLFFKSDYFKNRPSYWHWS
FTSPDEVILCSDNKQSMYCHLLCGIVQRDEVVKVGTAFVSTLLRVITFLEKHWKEICTNI
RYGRLSEWITDVSCRDSVSKILGEPNPELADLIENECDQKSWEGIIQRLWPKTKFIESIA
TGQMAQHIPTLEFYSNKLPLISSSYVSSETMFGINMNPLCKPQDVSYTFMPHFSYFEFLL
VDAGDEVEIVDLVDVKLGCHYEPLVTNHSGLHRYKMGDIVQVTGFYNSAPQFRFARRGNL
VLSVHMETTTDQDLLNAVTRAKTVLESSNLMLLDFTGYADISSIPGHYVLYWELKGKYNN
NDIAEIDNKILVECCYVVEESLENFYKEYRRNGWIGPLEIRVVYPGTFDSLMEFFISQGA
SSTQYKTPICIKSTEAIAILEEKVHARFFTGKSLSLKFSS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtggtctgatctcagcgacaaattagacgagaaggttttggaagacttgacg
tctaatgtgaagcaaatacaagacgatgtattaagggagatactcacacttgctaacact
gagtgtcttaggccttttctcaatgggagttctgataaagatgcttttaaaaagaatgtt
cccgtgacgacctacgacgatgtgaagcttttcatcgatcgtgtcgcaaatggagagccc
tttgatgtaatttcaggcacacctattaccggattctcactaagttccggaacttccgga
ggaatacggaagaggtttccatgtaccaaggaatacttggaaaacttgaacttcatctat
tgttaccgctcactcgttataagcaaacattttgatggtcttgagcatggaaagggaatg
gtgtttaacttttgtgttccagagcacataactccctctgggttgccagtttcagctgcc
acgacgctcttctttaagagtgattacttcaagaaccgaccatcatattggcattggtca
ttcacaagtcctgatgaagtcatattgtgttcagacaacaaacagagtatgtattgtcat
cttctctgtggaatagttcaaagagacgaggttgtgaaggttggtacagcctttgtttct
acattgcttcgtgtaattacatttcttgaaaaacattggaaagaaatctgcactaatatt
cgttatggtcgtcttagcgagtggatcactgatgtaagttgtagggactctgtttcaaag
atccttggagaacctaatcctgagttggctgatctcatagaaaatgaatgcgaccaaaag
tcatgggaaggtataattcaaagactttggcctaaaaccaaattcatcgaaagcattgca
actggccaaatggctcaacacatcccgacgttggagttttactctaacaagctgcctttg
atttcttcgagttacgtttcttcggaaacaatgtttgggattaatatgaatcctctatgc
aaaccacaagatgtgtcatacacgtttatgccccacttttcatatttcgagtttctactt
gttgatgctggtgatgaagtcgaaattgttgatcttgtggatgtcaagctagggtgccat
tacgagcctttggtcacaaatcactccggcctacaccgatataagatgggtgatattgta
caagtgactggattttacaatagtgcaccacagtttagatttgcccgtagaggaaatttg
gttctaagtgttcatatggagacaactacggatcaagatcttttaaatgcggtgacacgt
gcaaagacggttcttgaatcatcaaatttgatgttgttggacttcacaggctatgctgat
atttcttccattccaggtcactatgttctttattgggaactcaaaggaaaatataacaat
aatgacattgctgaaattgataacaagattttagtagaatgttgttacgtggtggaggaa
tccctggagaatttttacaaagaatataggagaaacggatggattggacctctagagata
agagtggtgtacccaggaacttttgattctctcatggagtttttcatcagtcaaggtgct
tcttcaactcaatacaagacacccatttgcatcaaatctacagaggccatagcaatctta
gaagaaaaggttcatgctcgattctttaccggaaagtccctttctttgaagttttcatct
taa
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