Raphanus sativus (radish): 108847039
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Entry
108847039 CDS
T06014
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
rsz04517
IgSF CAM signaling
rsz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108847039
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108847039
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108847039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108847039
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108847039
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Arp2/3 complex
108847039
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108847039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
EIF3I
Tricorn_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
RMC1_N
Beta-prop_NUP159_NUP214
eIF2A
WD40_MABP1-WDR62_2nd
Ge1_WD40
BNR_3
YqcI_YcgG
Motif
Other DBs
NCBI-GeneID:
108847039
NCBI-ProteinID:
XP_018475709
UniProt:
A0A6J0MUA2
LinkDB
All DBs
Position
3:complement(19989844..19993050)
Genome browser
AA seq
379 aa
AA seq
DB search
MAVVDVHRFAESITCHAWSPDHSMVAFCPNNNEVHIYKSSQDQWERLHVLEKHDQIVSGI
DWSSKSNKIVTVSHDRNSYVWSLEGGEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHESSVTNVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
KDSKAGSPAESKFGEQIIQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPLA
QSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKEVSSGSSYS
SQFSEAFTKFYGQSKATTANEASESSKSRGGVHDNCINSIVPLSKAGSPKVMRFSTSGLD
GKIAIWDLESMQEELGHQF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtggatgttcaccggttcgcagagtcaatcacctgtcatgcttggagtcct
gatcattccatggttgcgttttgccccaacaataatgaagttcatatctataaatcatca
caagaccagtgggagaggttacatgtcctcgaaaagcatgatcaaattgtttctggaata
gattggagttcgaagtccaacaaaatcgtcactgtttcccatgacaggaactcgtacgtg
tggagcctggaaggaggtgaatgggtaccgactcttgttattcttagactaaaccgtgct
gcactatgtgtccaatggagtccaaaagagaacaagtttgctgttggaagtggtgctaaa
actgtttgtatatgctactatgagcaagagaataactggtgggtcagtaaacttatccgg
aaacgccatgaatcttcagtcacaaatgttgcttggcatcctaataatattcttctggcg
acgacatctacagatggaaaatgtcgtgtattttcaacattcatcaaaggagttgacaca
aaggattcaaaagcaggctcaccagcagaatctaaatttggagagcaaattatacagctt
gatctttcatattcctgggcttttggtgtgaaatggtctccaagtggaaacaccttggct
tatgtaggtcatagctccatgatttactttgttgatgacgtcggtccttctcctttagca
caaagcgttgcgtttagagatttgcctcttcgtgatgtcctctttatatctgagaaaatg
gtgataggcgttggttatgacagcaacccaatggtgtttgctgctgatgatactggaata
tggagctttatcagatacataggagagaagaaagaggtatcctcaggttccagttatagt
tcgcagttttcggaagcatttacgaaattctacggtcagtcaaaggctacaacagctaac
gaagcttctgaatcctctaaatcacgtggaggcgttcatgacaactgcataaattccatt
gtacctcttagcaaagctgggagtcctaaagtaatgcgattcagcacttcaggattggat
ggcaaaatagccatatgggatctagagagcatgcaagaagagcttggccatcagttttaa
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