Raphanus sativus (radish): 108847083
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Entry
108847083 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108847083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108847083
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108847083
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108847083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
108847083
NCBI-ProteinID:
XP_018475756
UniProt:
A0A6J0MVW7
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All DBs
Position
3:complement(19597117..19598703)
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AA seq
304 aa
AA seq
DB search
MVRDTNAEQVLAGEASSSRPKRQRLSSPVEEEAEGGENVGEVTATVAAGDDEVTTTEVRS
GMLMDLDLLDCPVCCHPLTNPIFQCDNGHIACSDCCTNLRNKCPSCTLPIGIHRCRIMER
VVEATMVPCPNAKHGCTDKFPYGEELDHEKECSFALCYCPAPDCNYAGLCNDLYRHYHAN
HRGCCETFTCGFNGDAWMHISDKILVLQEGRGGPLVAVQCFEEEQGVNVTVNCIAPFAPG
VSEFSYQLSYYSHGGKTMSFGLFEMDRIQKVSFETPEKDFMCVPRYFLDGRESLKMKICI
RRRD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagatacgaacgccgaacaagtcctcgccggagaagcgtcgagtagccgcccg
aaaaggcagcgactctcctcccctgtcgaagaagaagcagaaggcggcgagaatgttgga
gaagtaacggcgacagtagccgccggtgacgacgaggttacaacaacggaggtacgatca
ggaatgctgatggatctggatcttctcgactgtcctgtttgttgccacccactgacaaat
cctatctttcagtgtgacaatggacatatagcttgctctgattgctgtaccaacctgagg
aacaaatgcccttcctgcactttgcccattggtatccaccgatgcagaatcatggagaga
gttgtggaagcaaccatggtcccatgccctaacgcaaaacatggctgcaccgacaagttc
ccttacggcgaagagttggaccatgagaaggaatgcagtttcgctctatgctactgtcct
gcaccagactgcaactacgctggtctgtgcaatgatctctaccgtcactaccatgctaac
caccgtggctgttgtgaaactttcacatgtggctttaacggggacgcgtggatgcacatc
agtgataagattttagttcttcaggaaggtagaggaggtccgttggttgcggttcagtgt
ttcgaggaggaacaaggagtgaatgtgactgtgaactgtatagcaccttttgctcctgga
gtttcagagttctcctatcaactctcttattactcgcacggaggtaaaacaatgtcgttt
ggattgtttgagatggataggattcagaaagtgagcttcgaaactcctgagaaggacttc
atgtgtgttcctcgctatttcttggatggacgggaaagtttgaagatgaaaatttgcatc
cgcaggcgagactaa
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