Raphanus sativus (radish): 108847136
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Entry
108847136 CDS
T06014
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108847136
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108847136
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_14
AAA_16
AAA_28
Zeta_toxin
ATP-synt_ab
AAA_30
Motif
Other DBs
NCBI-GeneID:
108847136
NCBI-ProteinID:
XP_018475826
UniProt:
A0A6J0MW32
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Position
3:complement(23522457..23525364)
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKSAAAASKSAATSSNGGVDSLSSGVDALQISDRTCTG
ILCSHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGLRE
LPIPDHMDIYHLSHEIEATDMTSLEAVMSCDEERLKLEKEIETLVEQDDGGGERLDTIYE
RLEAMDAATAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDE
PTNHLDLEACVWLEESLKNFERILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYC
QTRSELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VARDSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAG
KSTLLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLEVPALIYMMNEFPGNEEEKM
RAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKKHLKAKAGLDD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgctagcaagaagaaggctgctcagaagaaagccgccgccgccgccaaa
agaggcggtaaatccgccgcagcagcttccaaatccgccgctacttcttccaacggagga
gtcgacagcttgtcgagcggcgtcgacgcccttcagatatccgaccggacctgtaccgga
atcctctgctctcatcctcaatcgagagatattcgaatagagtcgttgtctgttacgttt
cacggttacgacctcattgttgattcgatgctggagcttaactacggaagacgttacggt
ctcctcgggctgaacggttgtgggaagtccactctcttaaccgcgatcggactcagggag
ctgccgattcctgaccacatggatatctaccatctctcccacgagatcgaagccactgac
atgacttctctcgaggctgtcatgagctgtgatgaggagagattgaagctggagaaggag
attgagactctcgttgagcaggatgatggaggtggagagcgtcttgacacgatctatgag
cggttagaggcaatggatgctgctactgcggagaagcgtgctgctgagattctgtttggt
cttggttttgacaaggagatgcaggctaagaagactaaagatttttctggtggttggagg
atgagaattgcgctggcgagagctctcttcattatgccgacaatccttttgcttgatgag
ccgaccaatcatttagatttggaagcttgtgtctggttagaagagagcctgaagaacttt
gagcgtatccttgtggtggtatcccactcacaggattttttgaacggagtgtgtaccaac
atcatccacatgcaaagcaagcagctcaagtactacactggtaacttcgaccagtactgc
cagacccgttccgagctagaagagaatcagatgaaacagtacagatgggaacaggagcag
atctcccacatgaaggagtacattgctcggttcggtcacggttcagccaaactcgctcgt
caagcgcagagcaaggagaagactttggccaagatggagagaggtgggcttacagagaag
gtggcaagagacagtgttctcgttttccgattcgctgatgtcgggaagcttccacctcct
gtgcttcagtttgtggaagtgtctttcgggtacacgccggactatcttatatacaagaac
atcgactttggtgttgacttggactcaagagtggctcttgttggacctaatggagctggg
aagagtactttattgaagttaatgactggtgagctgcacccgactgaaggaatggtgagg
cgtcacaaccacttgaagattgctcagtaccatcagcatctagctgagaagctggatctg
gaagtgcctgcgcttatctacatgatgaacgagttccctggtaacgaagaggagaagatg
agagctgccattggtaggttcggtctaaccggtaaggctcaagtgatgccgatgaagaat
ctctctgatggacagaggagccgtgtgatattcgcgtggttggcttataagcagcctaac
atgcttctgttggatgagcctaccaaccatttggatattgagacgattgactctctagcc
gaggcgttgaacgagtgggatggtggtttggttctggtgagtcatgacttcaggttgatt
aaccaagtggctcatgagatatgggtgtgtgagaagcagtgcattactaaatggaatggt
gacattatggacttcaagaagcatctcaaggctaaagctggacttgatgattga
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