Raphanus sativus (radish): 108847216
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Entry
108847216 CDS
T06014
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00750
Vitamin B6 metabolism
rsz01100
Metabolic pathways
rsz01240
Biosynthesis of cofactors
Module
rsz_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
108847216
Enzymes [BR:
rsz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
108847216
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
108847216
NCBI-ProteinID:
XP_018475905
UniProt:
A0A6J0MTW7
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Position
3:complement(28296983..28298248)
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AA seq
309 aa
AA seq
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MEGTSVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES
EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDAK
VERFANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacaagcgtcgtggcggtttacggtaacggtgcgataacggaggcgaagaaa
tctcccttctccgtcaaggtcggtttggctcagatgctccgcggcggagttatcatggac
gtcgtcaacgccgagcaggctcgcatcgcggaggaagcaggtgcttgcgccgtcatggct
ctggagcgtgtccccgccgacatccgcgctcagggaggcgtagctcggatgagcgatcca
cagatgataaaggagatcaagcaggccgttacgattccggtgatggcgaaggctaggatc
ggtcatttcgtggaggcgcagatcctcgaggcgatcgggatcgattacatcgacgagagc
gaggtcctgactctcgccgacgaagacaaccacatcaacaagcataatttcaggatccct
ttcgtctgcggctgccggaacctcggcgaggctctcaggaggatccgggaaggtgcggcg
atgattaggactaaaggcgaggcggggactgggaacattgtggaggccgttaggcacgtc
aggtccgttatgggtgacattagggttttaaggaacatggatgacgacgaggtcttcact
ttcgccaagaaactggctgctccttacgatctcgtgatgcagaccaaacagcttggccgt
ctccccgtcgttcagttcgccgcaggtggagtcgctactccggcagatgcggccctcatg
atgcagcttgggtgcgacggtgtctttgtgggttccggtatcttcaagagcggtgacccg
gctcgtagggcgcgtgctatagtgcaggctgtgactcattacagtgaccctgagatgctt
gtggaggtgagctgcgggcttggagaagccatggttgggatcaatctcaatgatgccaag
gttgagaggttcgctaaccgctccgagtga
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