Raphanus sativus (radish): 108847497
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Entry
108847497 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI7
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108847497
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108847497
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108847497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108847497
NCBI-ProteinID:
XP_018476246
UniProt:
A0A6J0MX73
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Position
3:19665613..19670625
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AA seq
555 aa
AA seq
DB search
MDSEEDMLDMYSGEDDFYSDDYKDSDNDDGDDDDDGEPDYGFVEEDADDSAMTASHRSQK
NYCVLREEDILRHQVDDIERVSVVLLLTKVEASILLRHYHWSVGKVHDEWFADEERVRNT
VGILESPVVPPSSDDTELTCGICFDSHPPENIVSVSCGHPFCTTCWTGYISTTINDGPGC
LMLRCPDPSCLAAVGHDMVDKLASDEDKEKYNRYFLRSYIEDNRKMKWCPAPGCDYAIDF
VAGSGNYDVSCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANSKPCPR
CKRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWMDHGERTGGFYACNRYEVAKQEGQYDET
ERRREMAKNSLERYTHYYERWASNQTSRQKAMTDLQQLQTHNLEKLSDKQCTPESQLKFI
LEAWLQIIECRRVLKWTYAYGYYLPDHEHAKRVFFEYLQGEAESGLERLHQCVEKDLLQF
LNAEGPSKDFNDFRTKLAGLTSVTKNYFENLVKALENGLADVDSHAACSSRSTSSKSTGC
SSKTRGKGKGSSRTG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaagaagacatgctcgatatgtattcaggagaggatgatttctacagcgat
gattacaaggatagtgataatgatgatggtgatgatgatgatgatggggaaccagattac
ggatttgttgaggaagacgctgacgactctgccatgaccgcctcccatcgctctcagaaa
aattattgtgttctgagggaagaagatattctcaggcatcaggtcgatgatattgaacga
gtctccgtcgtcctcttactcactaaagtcgaagctagtatcctgcttcgtcactatcac
tggagtgttggtaaagttcatgacgaatggttcgcggatgaagagagggtccgaaatact
gttggcattttggagagtcctgttgttccaccatcatctgatgacactgaacttacatgt
ggaatctgtttcgattcacaccctcccgagaacattgtttctgtttcttgcggccatcca
ttctgcactacatgctggacaggttacatcagcacgaccattaacgatggcccaggatgt
ttaatgctaagatgccctgacccatcttgtctagctgctgttggtcatgatatggttgac
aaattagcgtctgatgaagacaaggagaagtacaatagatattttcttaggtcttatatt
gaagacaacagaaagatgaagtggtgtcctgccccggggtgtgattatgcgattgatttt
gttgccgggtctgggaattatgatgtttcctgcttgtgctcctttagcttttgctggaat
tgcacagaggaggctcaccgacctgtggattgtagcacagtttcaaaatggattttaaag
aacagtgctgaatctgaaaatatgaattggatacttgccaattcaaaaccctgtccaaga
tgcaagcggccaattgaaaaaaaccagggatgtatgcatatgacatgcactccgccttgt
aaatatgaattctgttggctttgtcttggtgcatggatggatcatggggaaagaactggt
gggttttatgcttgtaaccggtacgaggtggccaagcaagaggggcagtatgatgagact
gaaaggaggagggagatggcaaaaaattcactagagagatacacacattactatgaacgc
tgggcaagcaatcaaacgtcgaggcaaaaggctatgacggatctgcagcaactgcagacg
cataatctcgagaagcttagtgataaacagtgcacaccagaatctcagctcaaattcatc
ctagaagcttggctgcagatcatcgaatgtaggagagtcttgaaatggacatatgcatat
ggatactacctacctgatcatgaacatgccaagcgagtgtttttcgagtatttgcaaggg
gaagctgagtcaggtttggagagactccatcaatgcgtagagaaggacttgcttcagttt
ctcaacgcggaaggcccatcaaaagatttcaatgatttccggacaaaactagctggtttg
accagcgtaacgaaaaattactttgagaacttggtgaaagctctggagaacggtcttgct
gatgtagactcacacgcggcttgcagcagcagatcaacaagctctaaatcaacaggttgc
agtagcaaaacaagaggcaaaggcaaaggaagttccagaactggttga
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