Raphanus sativus (radish): 108847527
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Entry
108847527 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108847527
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108847527
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108847527
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108847527
DNA replication proteins [BR:
rsz03032
]
Prokaryotic type
DNA Topoisomerases
108847527
DNA repair and recombination proteins [BR:
rsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
108847527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
Myb_DNA-binding
Myb_DNA-bind_6
ELM2
Motif
Other DBs
NCBI-GeneID:
108847527
NCBI-ProteinID:
XP_056861529
UniProt:
A0A6J0MV20
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All DBs
Position
3:27810635..27815667
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AA seq
506 aa
AA seq
DB search
MNCGTVRKVSRQDIKLVKGHMEKEDNDNLYKQCVNAGGGSSQYISWLSGDKRPLHDDVLG
FRKEINDITIDIALQWYADVYSDTVLGYANGVYTVDGGAHIDGVKASITRTFNILAKKKK
LVKDINLSGEHIREGLTCIVSIVVPNPKSGGQTKTRLGNSKIRETVDKSVQEYLTEYFEL
HPNVFESIYSKSFTAYKNALAMRERKVISRPKSVSASRTIPQNPTNSSSGKFEIVISLGE
SSGGAAKNGDDRRIQSKRTLEQPRSSGTVSTAPPERSLGNTSDSSFDKKRQKVVPSSHPR
SSSRQTVAAAASNRPNRKDVGVKIPGSNKTKPVIPVGPGFQAEIPVWIAPTKKGKFYGSP
GDSDTLRWLGAGVWPTYSLKKKVYYKKIGEGRPDSCPCPTPGSTDCVKLHIKEARELLEK
ETGGAFYTWKFDEMGEVGSKSWTAKEEQKFRSLVKKNPLSNRDGFWKYASKAFPRRSEKD
VISYYYNVFLNHRNTDDDHYGDFLAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtggaactgtaagaaaggtatcaaggcaagacatcaaactggttaaaggtcat
atggaaaaggaggataacgacaatctttacaaacaatgtgtaaatgctggaggaggctca
agtcaatatatcagttggctaagtggtgataagagaccacttcatgatgatgtgctggga
ttcagaaaggagatcaatgatatcaccatagacattgctcttcaatggtacgcagatgta
tattcagacacagtgttgggatatgcaaatggagtctacaccgttgatggcggagcacac
atagatggtgtgaaagcttcaataacaaggacttttaacatccttgctaaaaagaagaag
cttgtcaaggacataaacttaagtggggagcatattagggaaggcttgacttgcattgtc
tctattgttgttccaaatcctaaatctggaggtcaaacaaagacgagattaggaaattca
aaaatcagggaaactgtggacaaatcagtccaagagtacctaacggagtattttgaattg
catccaaatgtatttgagagcatttactccaaatcctttaccgcttacaagaatgctttg
gctatgagggaaaggaaagtgattagtagaccaaaaagtgtatcagcgtcgcgcaccatt
cctcagaacccgaccaacagctcttctggaaaatttgaaattgttatatccttaggagaa
tcttctggtggcgctgcaaaaaatggtgatgacaggcgtatccagagcaaaaggacactg
gaacagcctcggagtagtggtacagtctctacagctcctccggaaagatcgttagggaat
actagtgactcaagctttgacaagaaacgccaaaaagttgtcccatcctcacatccccgc
tcttcttcacgacaaactgttgctgctgctgcttcaaaccgtccaaaccgtaaagatgtt
ggcgtaaagatccctggctctaacaaaaccaaaccagttatcccagtcggtcctggtttc
caggctgaaattccggtttggattgcacctaccaagaagggaaaattttacggtagtccc
ggagattccgacactcttaggtggcttggagctggtgtttggcctacatatagcttaaag
aagaaagtttactacaaaaagatcggcgaagggagaccagactcatgtccttgtcctact
ccaggttcaaccgattgcgtaaagctacacattaaagaagcaagggagcttctagaaaag
gaaactggtggtgctttctatacttggaagtttgatgaaatgggtgaagtgggatcaaag
tcatggacggccaaggaagagcaaaagtttagatctcttgtgaaaaaaaatcctttgtca
aatcgtgatgggttttggaagtatgcttcaaaggctttcccaaggagaagtgagaaggat
gtcattagttactactataacgttttccttaaccaccgtaacaccgatgatgaccactat
ggtgacttcttagctggatga
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