Raphanus sativus (radish): 108847546
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Entry
108847546 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108847546 isoform X1
KO
K23288
syndetin
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108847546
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Others
EARP complex
108847546
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
108847546
NCBI-ProteinID:
XP_018476313
UniProt:
A0A6J0MWY3
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Position
3:11049052..11056591
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AA seq
1123 aa
AA seq
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MQPNLFPFGSVLGNPFLFNGGDLSEVGAGDFESSRVFFLLPLLLSQGEGMDLSKVGEKFL
SSVKSATSLGLLPSSSSSSSDRPEIPARAAAAAAVARALAGLPPDQRLSISSTATELSSI
YGNRLPPQEVEELEEGFYEEDFDPLRHILENVPDDDQSELAYFEKQATLRLVQLDRVAES
LSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHTHSKKK
QALLDMLPILTDLRHARVMQSSLEDLVEEGNYCKAFQVLSEYLQLLDSLSEFSAIQEMTR
GVEVWLGRTLHKLDSLLMGVCQEFKEDSYIMVLDAYSLIGDVSGLAEKIQSFFMQEVISE
THSVLKTVVREDNSSATQFSRLTYSDLCIQTPESKFRQCLLRTLAVLFQLIYSYHQIMSF
TPEKKVENLISTSSATTKKIDSVTDTACNPQDGGLSSTMSSTSIPSCTISAEESVGSETS
SPLQQASNNAVDEPRDSGETVSNGESPWYYLRKESAGFVSETLQRGRRNLWQLTTSRVSV
LLSSPAASSTSIHQFLKNYEDLSVFILAGEAFCGFEVVDFREKLKAVCENYFTAFHRQSM
HALKMVLEKETWTRLPPDTVQAINFAGLVGDGAPLIISSRSASGSSRFPLSTDPSGNRSG
GFSYWLKSGNPFSAKLTYYREDQDYSSDSGAASEDQDYSSDVVNSKVRNKKSINGGSPAS
GDENEDLHADYIDEDSQLPRRSFTRSISRSSSSHLSTNDDLKAQTGSSLCLLRSMDKYAR
LMQKLELVNVEFFKGICQLFGVFFYFVYQVFGQENTNSGGKGVANSSSHRLKSCLSRISQ
ECEQWIKPQFLSSSPSSSLAFTNTVHSLADVTPSSPLNTTSGHVSGISFSLKERCAAVDT
VSLVARILHKSKSHLQSMLMSRKGSLVEDFFGQLVGSVPDLTEHLHRTTARILLHVNGYV
DRIANSKWEVKELGVEHNGYVDLMLGEFKHYKTRLAHGGIPQEVQNLLLEYGVEIFAETL
VEGLSRIKRCTDEGRALMSLDIQVLINGLQHFVPTNVKPKLQIVDTFIKAYYLPETEYVH
WARAHPEYTKGQVVGLVTLVATMKGWKRKTRLEVVDKIESAAV
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctcttcccattcggctctgtcttgggtaatccgttcctcttcaatggc
ggcgatctaagcgaggttggtgccggtgacttcgagagctctagagttttcttcttactt
cctctcttgttgtcccaaggtgaaggcatggatttatctaaggttggcgaaaagttcctc
agctctgttaagtccgctacatcccttggactcttaccctcttcttcttcttcttcctct
gatcgccctgagattccggcacgtgctgctgctgcagctgctgttgctcgtgctctggct
ggacttcctcctgatcagaggttaagtatctcttctactgctactgagcttagctcaatt
tatggtaacagacttcctcctcaagaagttgaagagcttgaagaaggcttctatgaagag
gattttgatccactgagacatattttggaaaatgtgccagatgatgatcagagtgagctt
gcttattttgagaagcaggccaccctgaggttagtacagctggatagagtagcagaaagt
ctgtcacaccatgttatggagcatcatgaagtaatggtgaaggggatgaatttggttaga
gaactggaaaaagatttgaagattgcgaacgtcatctgcaagaatggaagaaggaatttg
acttcatctatgaatgaggcttcaagagatcttattgtacacactcattccaaaaagaaa
caagctcttctggacatgcttcctatattaaccgatcttcgccatgcaagagtaatgcag
tcaagtcttgaagaccttgttgaagaaggaaactattgcaaggcatttcaagttctgtct
gagtatttgcagcttcttgacagtctctctgagttttcagctatccaagagatgacccgt
ggtgttgaggtttggttaggaagaactcttcataagctggattcacttttgatgggcgtt
tgtcaggagttcaaagaagatagttatataatggtccttgatgcgtattcactaatcggt
gatgtctctggtctcgctgagaagatacaaagcttctttatgcaagaagttatatcagaa
acccactcagttctaaagaccgttgttcgggaggataacagttctgccacccaatttagt
agacttacatacagcgatctatgtattcagacaccggaatcaaagtttaggcaatgtttg
ttgagaacactagctgtgctattccagttaatatattcgtaccatcagataatgagtttc
actccagaaaagaaggtagaaaatttgatctcaacaagttctgcaacaactaaaaagatt
gattcagtgacagacactgcatgcaacccacaggatggtggtctctcttcaaccatgagt
tcaacaagcataccttcttgtaccatttctgctgaagagtctgttggaagtgaaacctcc
agtcccctgcagcaagcatctaataatgcagtagacgagcctagggattctggagagaca
gtatctaatggggagtcaccatggtactatctacgaaaagagagtgctggttttgtttca
gaaactctgcagagaggacgaagaaatctatggcaactcacaacaagccgtgtgtcagtt
ctgctctcatccccagctgcttcttcaacaagtatacatcagttccttaaaaactatgaa
gacctgagcgtctttatccttgctggggaagcgttctgtggatttgaagttgttgatttt
agggagaagctaaaggctgtatgcgaaaattatttcactgcgtttcataggcaaagcatg
catgcgcttaaaatggtcctggagaaggagacatggacgagattgccacctgatactgtg
caagctatcaattttgctggtcttgtgggggatggggctccccttatcatatcttccaga
agtgcctctggttcttccagatttcctctctcaactgatccgagtgggaacaggagtggt
ggattctcatattggctgaaaagtggaaaccctttctcagcaaagttaacgtactataga
gaagatcaagactactcttcagacagtggagctgcctctgaagatcaagactactcctcg
gacgttgtgaattccaaggtgagaaataaaaaaagcattaacggaggtagtcctgcttca
ggagatgaaaatgaagaccttcatgctgactatattgatgaggatagtcagcttccaaga
cgaagttttacacgcagtatatcaaggagttcttcttcgcatttgagtactaatgatgat
ttgaaagctcaaacaggatcctcgctgtgccttctaagatcaatggataagtacgcgagg
cttatgcagaaactagaacttgttaatgtcgaattctttaagggaatatgccaattgttt
ggggtctttttctatttcgtgtatcaagtttttggtcaagagaataccaattcaggtgga
aaaggagttgccaactcttccagccatcgtttgaaaagctgcttatcccggatatcacag
gagtgcgaacaatggataaaacctcagtttttatcatcatcaccatcttcttcacttgcc
tttaccaacacagttcatagtcttgcggacgtgactccatcaagtcccttaaatacaacg
tctggtcacgtatcaggcatatcttttagtctcaaggaacgatgtgctgcagtggacact
gtttctcttgttgctcggatattgcataaatcaaagtctcatctccaatcgatgcttatg
tcaagaaaaggttctttggttgaagacttctttggtcaactggttggttcagtacctgat
ctgacagagcacttacacaggacaactgcgaggatcctgctgcatgttaatggatatgtc
gaccggattgctaattctaaatgggaagtcaaggagcttggagtggagcataatgggtat
gttgatttgatgcttggggaattcaaacactacaaaacaaggcttgctcacggaggcatt
ccacaggaggtccaaaacctcctactggaatatggagttgaaatatttgcggagacgctg
gtggaaggtttatctagaataaaaagatgcaccgatgaaggacgtgctctaatgtcatta
gatattcaggtcttaataaacggtttacaacactttgtgccgacaaatgtgaaaccgaag
ttacagatagtggacacatttatcaaggcatactatctaccagagactgaatatgtccac
tgggcaagggctcatccggaatatacaaaaggacaggtcgtaggacttgtgactttagta
gccaccatgaaaggctggaagaggaaaacgcgtttagaagttgtggataagattgaatca
gctgctgtgtag
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