Raphanus sativus (radish): 108847580
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Entry
108847580 CDS
T06014
Name
(RefSeq) syntaxin-31
KO
K08490
syntaxin 5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108847580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108847580
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
108847580
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Syntaxin
Borrelia_REV
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
108847580
NCBI-ProteinID:
XP_018476358
UniProt:
A0A6J0MX30
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All DBs
Position
3:27492262..27494606
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AA seq
346 aa
AA seq
DB search
MGSTTFRDRTAEFRSLSQTLKKIGAIPYSVHQAESDPTTSSTKRSPPGGSSRSEFNKKAS
QIGLRIHETSQKTARLAKLGKESSIFNDRTLEIQELTVLIRNDITGLNMALSDLQTLQNM
EIADGSSYSHDKVGHYTAVCDDLKTRLMGATKQFQDVLTARSENMKAHENRKQLFSAKNA
AVDNNQNNAKAVPEPPPWSSSSVPSGNLQQQPLLPQVNTGAPSGSQLRRRSAIENPPSQQ
MEMSMLQQTVPRQENYSQNRAVALHSVESTITELSGIFTHLATMVTQQGELAIRIDDNMD
ESLVNVEGARSALLQHLTRISSNRWLMIKIFVVIILFLIVFLFFVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaacaacgttccgtgatcgcacggcggagtttcgttcgctctcccagacgttg
aagaagatcggagcgatcccgtattccgtccatcaagccgaaagcgatccaacaacatcc
tccaccaaacggtcgccgccggggggatcttcgagatccgagttcaacaagaaggcttcc
cagatcggtctgcgtatccacgagacgtctcagaagaccgctaggctcgctaaattgggg
aaagaatcgtcgattttcaatgacaggactctggagatacaggagctaaccgtgttgatc
aggaacgacatcacggggctgaacatggctctctctgatctgcagacacttcagaacatg
gagatcgctgacgggagcagctattcgcacgacaaagtcggtcactacacagctgtttgc
gatgacttgaaaaccaggctcatgggagctacaaagcaatttcaggacgttctaaccgcg
agatcagagaacatgaaggctcatgaaaacaggaaacagctcttctccgcgaaaaacgca
gcggtggataataatcagaataatgcaaaagctgtacctgagcctcctccttggtcaagc
tcatcagttccttccgggaatttgcaacaacagccactattgccgcaagtaaatactgga
gctccttctggtagccagcttagacgcagatctgctatcgagaatccaccatcgcagcaa
atggagatgtctatgttacagcagacagtcccgaggcaggagaactatagccaaaacaga
gctgttgcgcttcacagcgtggaatcaacgataacagagctaagtgggatattcacacat
ctagctaccatggtcactcaacagggagagctagctatcagaatcgatgacaatatggat
gaatcgttagttaacgtagagggagcacgaagcgctcttctgcagcatctcactcgaatt
tcatcgaatagatggctcatgatcaagattttcgttgttatcatattgttcctcattgtt
ttcctattcttcgtggcttga
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