Raphanus sativus (radish): 108847618
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Entry
108847618 CDS
T06014
Name
(RefSeq) axial regulator YABBY 1 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108847618
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
108847618
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
108847618
NCBI-ProteinID:
XP_018476406
UniProt:
A0A6J0MXM5
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Position
3:12353187..12355934
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AA seq
239 aa
AA seq
DB search
MSMSSMSSPSSAVFSPEHLSPSDHLCYVQCNFCETILAVSVPYTSMFKTVTVRCGCCTNL
LSVNMRSAGLPASNQLQLQLGPHSYFNTQNILEELRDAPSNMNMMVMNQHPNMNDIPSFM
NIHQQHEIPKAPPVNRRKMLVSFSFLFAPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHR
EAFSAAAKNWAHFPHIHFGLAPDNQPVKKTNMPQQEGEDNVGMKEGFYAPAANIGVAPY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcgtctatgtcttctccttcctcagctgttttttcgccagagcacctctct
ccttccgaccatctctgctatgtccaatgcaacttttgtgagacaattcttgcggttagt
gttccttacacaagcatgttcaagaccgtaaccgtccgatgcggttgctgtactaatctt
ctatctgtgaacatgagatcggctggcctcccagcttctaaccagctgcagctccagctt
ggtcctcactcttacttcaatacccagaatattctggaggagctgagagatgcaccatca
aacatgaacatgatggtgatgaatcaacatccgaatatgaatgacataccgtctttcatg
aatattcatcaacaacatgagattcctaaagcaccacccgttaaccgccgtaagatgcta
gtttccttctcatttctctttgctccagagaaaagacagagagtcccatccgcatataac
cgatttatcaaggaggagatccaacgtatcaaagctggtaatcctgatataagccacaga
gaagcctttagtgctgctgccaagaattgggcccacttccctcacatacacttcggacta
gcaccagacaatcaacccgtgaagaaaaccaacatgccccaacaggagggggaggataac
gtggggatgaaagaagggttctacgctcctgcggctaacattggtgtggctccttactaa
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