Raphanus sativus (radish): 108847669
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Entry
108847669 CDS
T06014
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108847669
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108847669
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108847669
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108847669
03041 Spliceosome [BR:
rsz03041
]
108847669
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108847669
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108847669
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108847669
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108847669
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108847669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108847669
NCBI-ProteinID:
XP_018476483
UniProt:
A0A6J0MXF3
LinkDB
All DBs
Position
3:11809571..11811868
Genome browser
AA seq
324 aa
AA seq
DB search
MAEKPAQEKEKEQEQKPAMEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSK
EIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLET
ICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAA
LIDDRILCMHGGISPELTSLDQIRNISRPMDIPESGLVCDLLWSDPSADVKGWGVNDRGV
SYTFGADIVAEFLQKNDMDLICRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMM
SIDESLMCSFQILKPSDKRSSPFL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagccggcgcaggagaaggagaaggagcaggagcagaagccagcgatggaa
ccagcggttctagacgatatcatccgccgtttggtagagtttaggaacacgaggcctgga
tctgggaagcaagttcacctcagcgaaggtgaaatccgtcagctctgtgctgtctccaaa
gaaatctttcttcaacaacctaatctcctcgaactcgaagctcccatcaagatctgcggt
gatattcatgggcagtattcagatctattgaggctatttgagtatggaggcttccctcca
gaagccaattatttgttcctaggtgattacgtggaccgtggcaagcaaagcttggaaaca
atatgccttctcttagcatacaaaatcaagtaccctgagaacttcttcttgctgagaggg
aaccatgaatctgcttccatcaatcgtatctacgggttctacgacgagtgcaaacgcagg
ttcaacgtcaggctctggaagatattcaccgattgcttcaactgccttcctgtggccgct
ttgatcgatgacaggatactatgtatgcacggtgggatctccccggagttgacgagcttg
gaccagatcaggaacatctcacgcccaatggatattcctgaatcaggtttggtttgtgat
ttgctttggtcggatcctagtgcagacgtcaaaggttggggagtgaatgatcgtggtgtt
tcgtacacttttggagctgacattgttgcagagtttttgcaaaaaaatgacatggacctt
atctgccgtgcccaccaggttgttgaagatgggtatgagttctttgcagacagacagctt
gttactgtattttcagctcccaactattgcggagagtttgacaatgctggcgcaatgatg
agcattgatgagagcttaatgtgctccttccaaattctaaagccgtcggataagagatca
tcaccatttctatga
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integrated database retrieval system
