Raphanus sativus (radish): 108847690
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Entry
108847690 CDS
T06014
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108847690
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
108847690
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
108847690
NCBI-ProteinID:
XP_018476515
UniProt:
A0A6J0MVN0
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Position
3:complement(27560410..27563609)
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AA seq
682 aa
AA seq
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MSISNNEAMLAPPPPPPFDPTKPSTPISFPIKTLQDLASRSYFDSFHFPFNRSSVSLRQQ
NIGSLPDRSRLLVCHDMKGGYVDDKWVQGCGNNKGFAIWNWYLMDVFVYFSHSLVTLPPP
CWTNTAHRHGVKVLGTFITEWDEGKATCKELLATKESAEMYAERLAELADSLGFDGWLIN
IENVIDQVQIPNLKTFVSHLTKVMHSSVPGSLVIWYDSVTVEGKLAWQDQLTEMNKPFFD
ICDGIFMNYTWKEDYPKTSAKIAGDRKHDVYMGIDVFGRNTFGGGQWKANVALDLLKSND
VSAALFAPGWVYETEQPPDYHTAQNKWWSLVEKSWGIVQSYPQSLPFYSDFNQGLGSHVS
LQGQRLSDAPWYNISCQNLQPLLEFNEGNKSEIMQVTVDGREASYNGGGNISFRGTLKRN
AHFTARLFKPNLQLPGSPISVSYSVKSDERSMLGILLRFSTPSQETKSLVMAPNEYMHRF
GDMYFLPCLRRTKSDWTVHETNLIMDGHTLTEISALCYGPDDLAEETNTGGYFALLGHIS
IKDLKKTKLFPPASSWVVEAHNVEIVPGDSGSRTLSCKLEWKLKQPEEDYVFTRYNVYAE
KLISYRTRKVMEEPRNEKVFLGTAHVDAYYVSGMVVGPDVKKVRFVIQTCGEDGSWQELD
ASPSILVEAEQLSSKICCCGLI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatccaacaacgaagctatgctagctccacctccacctccacctttcgatccc
actaagccatccacaccgatctcatttccaatcaaaactcttcaagacttggcttctcgg
tcttacttcgactcctttcacttcccctttaaccgctcctccgtctctctccgacaacag
aacatcggttccttgcctgaccgttccaggcttcttgtctgtcacgacatgaaaggaggg
tacgttgacgacaagtgggtacaaggatgcggaaacaacaaaggtttcgcgatctggaac
tggtacttgatggatgtttttgtctacttctctcactctctcgtcactcttcctcctcct
tgctggaccaacactgctcacagacatggcgttaaggtactggggactttcatcactgag
tgggacgaaggtaaagctacgtgcaaggagttgttggcgacaaaggagtctgctgagatg
tatgcagagcgcttggcagaacttgctgattctctaggctttgatgggtggctgattaat
atagagaatgtaatagatcaagtccagattccaaatttgaagacttttgttagccatctt
acaaaagtcatgcattcatctgtacccgggagcttagtgatatggtatgatagtgtcact
gttgaaggcaaacttgcttggcaagatcagttgactgagatgaacaaacctttctttgat
atatgtgatggaatattcatgaactatacatggaaggaggactaccccaaaacatcagcc
aaaattgctggcgacagaaaacatgatgtctacatgggaatagatgtgtttggtcggaac
actttcggtggaggccagtggaaggcaaacgttgcacttgatttgctgaagagcaacgat
gtatcagctgctttatttgctcctggatgggtatacgagacagagcaaccacctgattat
catactgcacaaaacaaatggtggtcacttgttgagaagtcttggggaatagttcagtcg
tatccacaatccttacccttctactcagacttcaatcagggacttggttctcatgtttct
ctccaaggtcagagactatcagatgctccctggtacaacatctcttgccaaaatcttcag
ccactcttagaattcaatgaaggaaacaagtcagagatcatgcaggtcactgttgatggt
cgagaagcatcatataacggaggagggaacattagtttcagaggaacactaaaaagaaat
gcacatttcacagcaagactcttcaaacctaatcttcagcttcctggttcccctatctct
gtctcctactctgtgaaatcagatgaaagatctatgctaggcattctcctccgtttttca
actccttcgcaggagacaaagtccttagtcatggctccaaatgaatacatgcacagattt
ggtgacatgtacttcttgccatgcctaagaaggaccaaatccgactggacggtgcacgaa
acaaaccttattatggatggacatacactgactgagatctctgccttgtgctacggacca
gatgatcttgcagaagaaacaaacacaggaggatattttgcattgcttggccatatctct
atcaaggacctgaagaaaaccaaactcttccctccagcttcatcatgggttgtcgaggct
cataacgtagagattgtaccgggtgattcaggctccaggaccttaagctgtaagctagaa
tggaaactgaagcaacctgaggaggattatgtattcacaaggtacaatgtgtatgcagag
aagctgatttcatacaggacaaggaaggtaatggaagaaccaagaaacgagaaagtgttt
cttgggacggctcatgttgatgcttattatgtttctggtatggtggttggaccagatgtg
aagaaagtaaggtttgtgattcagacctgtggtgaagatggttcatggcaggagctggat
gcttccccaagcattctggttgaggcagaacagctcagttcaaagatttgttgttgtggg
ttgatttga
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