Raphanus sativus (radish): 108847812
Help
Entry
108847812 CDS
T06014
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
rsz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108847812
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108847812
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108847812
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108847812
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108847812
03041 Spliceosome [BR:
rsz03041
]
108847812
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108847812
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108847812
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108847812
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108847812
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108847812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108847812
NCBI-ProteinID:
XP_056862179
UniProt:
A0A9W3DEC9
LinkDB
All DBs
Position
3:complement(3698382..3708139)
Genome browser
AA seq
392 aa
AA seq
DB search
MVLYPNHSKLHLQDKETGRTYVVGVRVRSWVEPFRGRYPGFTNRCVFFTYLTLSLNNRLS
QREKRDLGLTMDENLLDDIIRRLLETNNGKAAKQQVKLLEAEIRQLCYASKEVFLSQPNL
LELEAPIKICGDVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKL
KYKLNFFLLRGNHESASINRVYGFYDECKRKYNVRLWKSFTDCFNCLPVAALIDDKILCM
HGGLSPDLKSLDDIRRIPRPIDVPDQGVLCDLLWADPEKGVKGWGENERGVSYTFGADIV
AEFLQTHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCS
FQIIKSTEKKIRFGFNNVSRPGTPPHKGGRGG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtatccaaaccactcaaaactccatcttcaagataaagagactggaagaacc
tacgtggttggtgtaagagtccgcagttgggttgagcctttcaggggacgttatcctggt
tttacgaatcggtgtgtcttcttcacctacttaactctctccctcaacaatagactctca
cagagagagaaaagggatttagggctaacgatggacgagaacttgctagacgacataata
aggaggctactggaaacgaataacgggaaggcggcgaagcagcaggtaaagctacttgag
gcggagatacgtcagctctgctatgcttccaaagaggtgtttctcagccagcctaatctc
ctcgagctcgaagctcctatcaagatttgcggagatgttcacggtcagttcccagacctt
ttgcggttgtttgagtacggtggctatcctccagctgccaactacttgttccttggggac
tatgttgatcgtggtaagcagagcattgagaccatatgccttctccttgcctacaagctc
aaatacaagctcaacttctttcttctcagaggcaaccacgagtccgcttctatcaaccgt
gtctacggattctacgacgaatgcaaaaggaaatacaacgtgagactatggaagagtttc
accgactgcttcaactgtctccctgttgctgcgctcattgacgacaagatcctctgtatg
cacggtggactctcccctgatctcaagagcttggatgatatcaggcggattcctcgtcct
atcgatgttcctgatcagggtgttctctgtgatttgttgtgggctgatcctgaaaaagga
gtcaaaggctggggggagaatgagagaggtgtctcgtatacttttggtgccgacatagtg
gctgagtttcttcaaactcatgaccttgatcttgtttgccgagctcatcaggttgtggaa
gatggatatgagttctttgcaaatagacaactggtgacgatattctcggcgcccaattac
tgtggtgagtttgataatgctggcgcaatgatgagtgttgatgatagcttgacatgttcg
ttccaaatcatcaagtcaactgagaagaaaataagatttggattcaacaacgtttctaga
ccaggaaccccaccacataagggaggaagaggtggttaa
DBGET
integrated database retrieval system
