Raphanus sativus (radish): 108847874
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Entry
108847874 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI11
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108847874
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108847874
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108847874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
Ariadne
zf-C3HC4_2
IBR_2
zf-RING_5
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108847874
NCBI-ProteinID:
XP_018476738
UniProt:
A0A6J0MY47
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Position
3:complement(19523260..19525238)
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AA seq
523 aa
AA seq
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MDYSDDDVMVNTDSGEESLLSDNQVDSDYEFTDQDMDNASITKRSQLSYLVLKEDDIRKH
QRTDIEHVSTVLSISQVEAIVLLLHYQWNVSKVQDEWFTDEEKVRELVGILKEPVVDLND
REMNIECGICFESYPQKEVATVSCGHPYCNACWTGYITTSINDGPGCLTVKCPEPSCSAV
ACQDMIDKVITDKELKEKYYRYFVRSYVEASGNKIKWCPSPGCENAIDFESRSGSEHYDV
SCLCSHEFCWNCGEDAHRPVDCDTVSKWIAKNTDESENTNWILANTKPCPNCKRQIEKSM
GCNVMRCSICKCMFCWNCLLPFTDHKKCNKFEGDDETDINKRKRAKSAIDRYMHYFERWA
SNQSSRVIAMADLKKFQSVQLKLLSLRQGTTESQLQFTIEAWRQIIECRRVLKWTYAYGY
YLPEQEQTKKQFFEYLQGEAEAGLERLHHCAEEELKHFVFKTQDSSKKFGDFRRKLTGLT
EATKTYFENLVKALENGLADVALNESSKSETNSKPATKRRKLK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggattattccgatgatgatgtcatggtcaatactgattcaggcgaggagagtttattg
agtgacaaccaggtagattccgattatgaattcaccgatcaagacatggacaacgcttcc
ataaccaaacgttctcagcttagttacttagttctcaaggaagacgacattcgcaagcat
caaagaaccgatattgaacatgtttcaacagttctttcaataagccaagtggaagcaatc
gttctgcttcttcactaccagtggaatgttagtaaagtccaagatgagtggttcactgac
gaagagaaagtccgtgaactcgttggtatactgaaggagcccgtcgttgatcttaatgac
agagaaatgaatattgaatgtggaatttgtttcgagtcgtatccccaaaaggaagttgca
accgtttcttgcggtcatccttattgcaatgcatgttggaccggttacatcactacatca
atcaatgacggtcctggttgtttgacggttaagtgtcctgagccttcttgttctgccgtg
gcatgtcaagatatgatcgataaggtcataaccgataaagaacttaaggagaagtactat
agatactttgttagatcttacgttgaagctagcggaaacaagataaaatggtgtccgtca
cctggatgcgaaaacgcgattgattttgaaagtagaagtggaagtgaacactacgatgtt
tcttgcttgtgttctcatgaattctgctggaactgcggtgaagatgctcaccgccctgtg
gactgcgacacggtgtcgaaatggatagctaagaacactgatgaatccgagaacacgaac
tggatacttgccaacacaaagccttgtcctaattgcaaacgtcagatcgagaagagcatg
ggatgtaacgttatgagatgctcgatttgtaaatgtatgttttgttggaattgtcttctt
ccatttactgatcacaagaagtgcaacaagtttgagggtgatgatgagactgatattaac
aagagaaaaagggcgaaaagcgcaatcgatagatacatgcattattttgaaagatgggca
agcaaccagtcttcgagggtaatagccatggcagatttgaagaaattccagtcggtgcaa
cttaagttgcttagtctcagacaaggcacaacagagtctcagctccagttcaccatagag
gcatggcgtcagattattgaatgtagaagggttttgaaatggacatatgcatatggatac
taccttccagagcaggaacaaaccaagaaacagtttttcgagtatttgcaaggggaagct
gaagctggtttggagaggctacatcattgtgcagaggaggagttgaaacattttgtcttc
aaaactcaagattcgtcaaaaaaatttggtgacttccggaggaagctaactggtttgacc
gaagcaaccaaaacttacttcgaaaatctagtgaaggctttggagaatggtcttgctgat
gtagcacttaatgagagcagcaaatcggaaacaaattcgaaacctgctaccaaaagacga
aagctgaagtga
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