Raphanus sativus (radish): 108847882
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Entry
108847882 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108847882
KO
K20305
trafficking protein particle complex subunit 8
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108847882
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108847882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
108847882
NCBI-ProteinID:
XP_056861330
UniProt:
A0A9W3DBW1
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All DBs
Position
3:25237212..25244954
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AA seq
1271 aa
AA seq
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MVEPVNSSLGKMLLEEVSPVVMVLCTPLVEETFLKNGLSFVETLKPFCNFNNIDVPVRTS
GDQLYRLKKFTLRLFNASDIKQPNVEVAKQRLEHVITEAGEKVFDDLKSDPPQITHILSD
PESEIAPTWFQYYNKELIRTLSFSEHEAFDHPVACLLVVSSKDEQPVNKFVDLFNTNRLP
SLLNDGVMDPKILKHYLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGNVE
HQANPWASFKSSVSANKLGCALTGDDIVEIKDLMQEFTSRHIIPHMEQKVRELNQQISAT
RKGLRNQIKNLWWRKGKDDVPDSTKGSMYTFSSTESQIRILGDYAFMLHDYELALSSYRL
ISTDYKLDKAWKHYAGVQEMMGLAYFISNQSEKEAEYCMENAFSTYLKLGRSGFQNATRC
GLWWAEMLKARDQYKEAASAYFRICGEEPLHAAVMLEQASYCFVLTKPAMLNKYGFHLVL
SGDHYKNCDQVSHAIRTYRSAISVYESTTWSHIKDHVHFHIGRWYALVGMHDVAVRNMLK
VLDCGKQSKATQEIFLRDFFEIVKKTGMKHEVVGLQLPFINMSSLQVIYEDHRTYASQAS
VLVQESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVAGESVKVDLEFRNPL
LISTSITSVSLICELTSNSDDLTVSKEPSSLSVGTESSAEHNQGTTSGFSSFTLSEVDLT
LGGGEKKMVRLTVTPSEEGILKIVGVRWGLSGSVVGVHYFQSTPGKAKTNKGRRKNKLTP
TDALKFLVIKSLPRLEGSIDHLPEQLYAGDLRYLVLELKNKSESPIKNLKMKISHPRFVN
PGNHEEEVTTDFPDCLKKGHEQNNLQRETSSVFSFPKDVSLQGDKSLRWPLWFRAAIPGT
ISLYFTIYYEMENVSSIMKYRTLRMNYNLKVLPSLETSFEITPSPSRLQEFLVRMDIVNR
ANSDSFHIHQLSTVGCRWGISLLERVDKILPSKSLLPGQALSCHFMIKDNRKSGTEEEKT
ISNPPSQTDVKMFSQDDDEKLFDIVNSPLTNFHKSERSCQETSDQLSTNTVDFILISHVA
KSSNSSGVADIPKILSHHSCHNRIRSSNPLSWSLYGPRTIYHDFSTSLCEVQLKLVIRNT
SSGLSSVSFNAIDCLPDAAAPAPSSGNQSGWRYVPDVTEEMKLTSDVMGSRLGKPPSSME
SSPPFIWSGLSSTKFEIPPLSTTEVPLQISVFSPGIYNLSSYKLTWELSGHEDASSGTCQ
GYPYYLTVLQS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcatcgcttgggaaaatgctattggaggaggtcagcccagta
gtcatggttctctgcacgcctctcgttgaagagactttcctcaagaacggactatccttt
gtggagacgctcaagccattctgcaacttcaataacatcgatgttcctgttcggacctca
ggcgatcagctttatcggctgaagaagtttactctgagattgtttaatgcctccgatatc
aaacaaccaaacgtagaggttgcaaagcaacggctagagcatgttatcactgaagctggg
gagaaagtttttgacgatttgaaatctgaccctcctcaaattactcatatactctctgat
ccagagtctgaaattgcacccacatggtttcagtattacaataaggaacttatccgtaca
ctctcgttttcagaacatgaagcttttgatcatcctgtggcttgtctcttggtcgtctca
tcaaaagacgaacaacctgtcaataaatttgtagatcttttcaacaccaatagattacct
tctttgcttaatgatggtgtaatggacccaaagattttgaagcattacctgttggtgcat
gacaatcaggatgcaacaacagagagaacgtctaaagttctgtctgagatgagaagtaca
tttggaaacaatgagtgcaacttactttgcactaattcatctaaagaggggaacgtggaa
catcaggctaatccctgggcttcatttaaatcaagtgtttcggccaacaaacttggatgt
gctctcactggcgacgatattgtggagatcaaagatctgatgcaagagtttacttcgagg
catataatccctcacatggagcagaaagttcgagaacttaatcaacagatttctgcaaca
aggaaaggacttagaaaccaaataaaaaacttatggtggaggaaaggaaaagacgatgtt
ccggattcaaccaaaggttctatgtatacatttagctccactgaatctcaaattagaatt
ttgggtgactacgccttcatgttgcatgattatgaacttgcattgtcaagctatcgctta
atatcaaccgattacaagctcgataaagcttggaagcactatgctggtgttcaggaaatg
atgggacttgcgtatttcatctcaaaccagtcagaaaaggaagctgagtactgcatggaa
aatgcattcagcacttatctgaaacttgggaggtctggctttcagaatgctacgagatgt
gggctctggtgggcagagatgctaaaagctagagaccagtacaaagaagctgcttctgct
tacttccgcatatgtggagaggaaccattacacgccgcagtcatgttagagcaagcttct
tactgcttcgtgttaactaagccagcgatgctaaacaagtatggatttcatctagttctc
tcaggagaccattataaaaactgtgatcaggttagccatgcaattcgtacatatagaagt
gcaatctccgtttatgaatcaactacatggagccatatcaaagaccatgtacattttcac
attggacggtggtacgcacttgttgggatgcatgatgttgcagttagaaatatgctcaaa
gtactggactgtggcaaacaatccaaggcaacccaagagatttttctcagagactttttc
gagattgttaagaaaactggaatgaagcacgaggtggtgggacttcaactaccatttatt
aatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagcttct
gttcttgtacaagagagcatctggcagtcactggaggatgatatcattccatcattaaac
tctggaaagtcaaactggctggaattacagtcaaagctactaccaaagaaatacaaggaa
tcaaatgtttgtgtggctggagagtcggtgaaagtggatctggagtttaggaatccattg
cttatctctacttccataacaagtgtttctctcatatgtgagcttacctcaaattctgat
gacctaacagttagtaaagagccaagtagcttaagcgtggggaccgagagttccgcagaa
cataatcagggtacaacatctggtttctcttctttcactttgtctgaggtggacttgaca
ttaggcggaggcgagaaaaaaatggtgagactcacggttacccccagtgaagaaggtatc
ctcaaaattgtcggtgtaaggtgggggttgtctggttccgttgtaggtgtgcattacttc
caatctacccctggaaaggcaaaaactaacaagggaagacggaaaaacaaacttactccc
actgatgccttgaaatttttggtcatcaagagtctgcccaggcttgagggttcaattgat
catcttcctgagcaattatatgctggagatctacgttatcttgttttagagttaaaaaat
aaatcggaatccccaataaagaatcttaaaatgaagattagccatccaagatttgtaaat
cctggaaatcatgaagaagaggtgacaacggactttccagattgcttaaagaagggccat
gaacaaaataatctccagcgtgaaacaagtagtgtcttttcatttccaaaggatgtgtca
ctgcaaggagataaatctttgaggtggcctctctggtttcgagctgccatcccaggaaca
atatctttgtatttcacaatatactatgagatggaaaatgtatcaagcatcatgaaatat
cgaaccctaaggatgaattacaatttaaaggttttaccatctctagagacctcgttcgaa
attactccctctccatcaagattgcaagaatttcttgtgcgtatggatattgtgaaccgt
gcgaattcagattctttccacattcatcagttgtcgacagttgggtgtcggtggggtatc
tcgttgcttgagcgtgttgataaaatcttaccttccaagtctctgcttcctgggcaagct
ttatcatgtcacttcatgattaaggataacagaaaatccgggactgaagaagagaaaacc
atatccaatcctcctagccaaactgacgtaaaaatgtttagtcaggatgacgatgaaaag
ctttttgatatcgttaactcacctttaacaaactttcataaaagtgaaaggtcatgccag
gaaacttcagatcagttaagtaccaataccgttgacttcattctaatctctcacgtagca
aaatccagcaattcatcaggagtggcagatataccaaagattctgtctcaccattcatgt
cacaatagaatcaggagttcgaacccgctatcctggtccctatacggtccccgaaccata
taccacgacttttcgacctccttgtgtgaagttcaactaaaattagtaatcagaaacaca
tctagtggattatcatctgtgagcttcaacgccattgattgcctaccagacgcagcagca
ccagctccttcctctggaaaccaatctgggtggcgctacgtgccagatgtaacagaggaa
atgaaactgacttcagatgtaatggggagccgtctagggaaacctccatcttccatggaa
agctcacctcctttcatatggtcaggtttaagttccaccaagttcgaaatcccgccattg
tcaacaacagaggtcccgctgcagatatcggttttctctccaggtatctacaatctctct
tcgtataagcttacctgggagctttccgggcatgaagatgcatcatcagggacttgccaa
ggctatccttattaccttactgttcttcagtcttga
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