Raphanus sativus (radish): 108847889
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Entry
108847889 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108847889
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108847889
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108847889
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108847889
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108847889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
DUF7351
Motif
Other DBs
NCBI-GeneID:
108847889
NCBI-ProteinID:
XP_018476759
UniProt:
A0A6J0MX95
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MEEAASNNRSSAVSSSSASAVFRRIEFHPARKPWNGFSNKGGSDFKLETLNPSFSSANKL
ALSSSSSVKKRDGSDSLDRALTFSITIRKIGAGLENLGNTCFLNSVLQCLTYTEPLAAYL
LNVGHEKRCHVAGFCALCAMQKHVRSALQATGDTLAPKYLVSNLRCVSRNFRNGRQEDAH
EYMINLLECMHKCSLPSGVPSESSDAYRSSLVHKIFGGTLRSRVQCAQCSHCSDKFDPFL
DLSLDISKADSLQRALTRFTSVELLDDGAKVYQCERCKQKVKATKQLTVSKAPYVLALHL
KRFEAHSSDKIDRKVEFPSAVDLKPFFSGPNDGDLKYTLNSVLVHYGRSIHSGHYSSFVR
TSTSGMWYSLDDNKVSQVSEKIVFNQKAYMLFYVRDRQNTAPKNTPAMVKKESLSTNRVP
MVISSNRNDRVSGSAVMKASSLNGLGANGTTPLRSCNQGAAAAGISQRESNSKENLQKEL
PPSQANGEGSLVKENIKAASATLPGKVSPLLDGSGNAQILVNLPTSVAKAEETLTTPRKT
RKGKTKTTLQVGSRLFKLALGVRKKKKQKKGRSSTFAGKVISEEVLSEKRAEDQERSTSE
ITSEVASGSSCSPGKSVHNERKMNSNGNMLLGSATTGDLNERANNQNGAVLASDQQPPLR
SSGLPKASQVAKRKREPSKDEQIVLQKDEPTILTRGLPETVVAKWDEEVSASKKMGMSEG
TKIGYVADEWDEEYDRGKKKKIRIKEEMYVGPNPFQAFASKKQTDTKKKWTQRMNTAKTG
FRK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcagcgagtaataatagatcctccgccgtttcgtcctcttcagcttcagcc
gtcttcagaaggatcgagtttcatcccgcgaggaaaccctggaacggcttctctaacaaa
ggtggttccgatttcaagttggagactttgaatcccagcttctcttctgccaacaagcta
gctctctcttcatcctcctccgttaagaagcgagacgggtccgattcgctcgatcgggcg
cttacctttagcataaccatccgtaaaatcggtgcgggtttggagaatctcgggaataca
tgttttcttaactcggtattacagtgtttgacatacactgagcccttagctgcttaccta
ctaaatgttggccatgagaaacgctgccacgtggctgggttttgtgctttatgtgcaatg
cagaagcatgtgaggagtgctctccaagctactggcgacacattagccccaaaatatttg
gtctcaaacctgcgatgcgtatcgagaaacttcaggaatggtcggcaggaagatgcacat
gagtacatgatcaatttgctagaatgcatgcacaagtgttctctgccttctggtgtgcca
agtgagtcctctgatgcttacaggagcagcttggttcacaaaatattcggtggtaccctc
cgtagtcgggtgcaatgcgcgcaatgttcacattgctccgacaagtttgatccgtttctt
gacctaagcctagacatttccaaggcagattcgttgcagagagcgctcacacgtttcact
tctgttgagctcttagatgacggtgcaaaggtttaccaatgtgaaagatgcaagcagaaa
gttaaggctacaaaacagctgactgtttctaaagcaccgtacgttctagctctgcatctc
aagcggtttgaagcacatagttccgataaaatcgaccggaaagtcgagtttccctctgca
gttgacttgaaaccttttttcagtggtccgaatgacggtgacttgaagtacactctgaat
agtgttttagttcattatggtcgaagtattcattctggtcactattcatcctttgttcgc
acttcaactagtggcatgtggtattcccttgatgacaacaaggtttcccaagttagtgag
aagattgtgttcaatcagaaggcgtatatgctattctatgtccgtgatagacagaacacg
gccccaaagaatacgcctgccatggttaaaaaagagagtctttccacaaacagagttcct
atggttatatcttctaacagaaatgatcgagtgagtggttcagcagtcatgaaagcatct
agtttgaacggtcttggtgccaatggtacaacacccttgagatcatgtaatcaaggtgct
gctgctgctggcatatcccaaagagaatcaaattccaaagagaaccttcagaaggaactg
ccaccatcacaggctaatggggaaggatctttggtaaaggagaatataaaggctgcaagc
gcaacgctaccagggaaggtttcccctctactggatggcagtggaaacgctcaaattctt
gtgaacttgccgacttctgtagctaaagctgaggagactctcaccacaccaagaaagact
cgcaagggcaaaacaaaaacgaccctgcaagtgggatcaagactttttaagctggccctt
ggcgtacgcaaaaagaagaaacagaagaagggaagatcaagtacctttgctggtaaggtt
atttctgaggaggttctatcagagaaaagagctgaagatcaagagcgttccacgtcagag
ataactagcgaagttgcttctggctcttcttgctcgcctgggaagagtgtccataatgaa
aggaaaatgaatagtaatgggaatatgttgcttggctctgcgacgactggagatctcaat
gagagagctaataatcaaaatggtgccgttcttgcttcagaccaacaaccaccgttaagg
agttctggcttacctaaagcaagccaagtcgccaaaagaaagagagagccgtcaaaagat
gaacaaatcgtgttgcagaaagatgagccgacgattctcacccggggtttgccagagaca
gttgttgccaaatgggatgaggaagtctcggcttctaagaagatgggaatgagtgaaggc
actaaaatcggttacgtagcagatgagtgggatgaggagtatgatagagggaagaaaaag
aagataaggatcaaagaggagatgtatgtaggaccgaacccgttccaggcgtttgcatca
aagaaacagacagacacaaagaagaaatggacgcaacgcatgaacaccgcaaagacaggt
ttccggaaatga
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