Raphanus sativus (radish): 108847890
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Entry
108847890 CDS
T06014
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108847890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108847890
Membrane trafficking [BR:
rsz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108847890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
108847890
NCBI-ProteinID:
XP_018476760
UniProt:
A0A9W3CKS0
A0A6J0MWD0
LinkDB
All DBs
Position
3:22305177..22310037
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AA seq
732 aa
AA seq
DB search
MAMRDLVNGGAACAVPGSSSSSNPLGALTNALLGSSSKTQERLKEIPNATSSGPGPQFYS
QDQHLSSLPGSELDQPLLQPGAQGSEFFRGFRSVDQNGLGAAWDEVQRGAGPMPPMGPMY
EPPLQPTFEGPPQRVLSNFLHSFVESSRGGIPFRPAPVPVLGLSQSDKQCIRDRSSIMAR
HFFADRGEEFINSQVNALLSSLDIDDGIQTRGHIPGRFRELDDYWNESQAVTKPGLHPAD
NWAAEFDQHQHGMNHGGPDAWVNSFEQQHGVNGWATEFEQGQSQLMSNQMRSMNMQNLAA
MEQTRKLAHTLSQDGNPKFQNSRFLQFVSKMSRGELIMDENEVKPGPAPGDWTTEYEQQY
LGPPSWADQFANEKLARGPEQWADEFASANRQQESAEDQWVNEFSKLNVDDWVDEFAEGP
AGGSSADAWANAYDEFLTERNAEKQNSGVYVFSDMNPYVGHPEPMKEGQELFRKGLLSEA
ALALEAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPSNLEVLLALGVSHT
NELEQATALKYLYGWLRNHPKYGSIAPPELADSLYHADIARLFTEASQMNPEDADVHIVL
GVLFNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDLKPN
YVRAWANMGISYANQGMYKESIPYYVRALAMNPKADNAWQYLRLSLSCASRHDLIEACEA
RNLDLLQKEFPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagaccttgtcaacggcggagcagcctgcgcagttcccggctcctcttct
tcctccaaccctctcggtgctctcaccaacgccctactcggttcctcttccaaaactcag
gaaaggctcaaggagatacctaatgcaaccagttcaggtcctgggccacagttctactct
caggaccaacacttaagctcgcttcctggttctgagttggatcagcctcttctccagccc
ggtgctcagggctcagagttcttccgtggcttccgctctgtagatcagaatggtctcggt
gctgcttgggatgaagttcagcgtggtgctggacctatgcctcccatgggtcctatgtat
gagcctcctctccagcccacttttgaaggacccccgcagagagtcttgtctaactttctg
cattcgtttgttgagagtagccgtggtggcattccctttcgtccagcacctgtccctgtc
ctgggattgtcacagagtgacaaacagtgtatacgtgatcgtagtagcataatggcccgg
catttttttgctgacaggggagaagaatttatcaattctcaggtaaatgcgttactgtca
tcgttagatattgatgatggcattcaaactagaggtcatattcctgggagatttcgggag
ctagatgattactggaatgagtctcaggctgttacgaaacctggtttacatcctgcggat
aattgggcggctgaatttgaccagcatcagcatggtatgaatcatgggggtcctgacgca
tgggtcaactcttttgagcaacaacatggtgtgaatgggtgggccaccgagtttgagcag
ggtcaatctcaactgatgtcaaaccaaatgagaagtatgaatatgcaaaatttagctgca
atggagcaaactcgtaagcttgctcatacactgtctcaggatggcaatccgaaatttcag
aattcaagattccttcaatttgtttcaaagatgagccgcggtgaactcattatggatgag
aatgaggtcaagcctggaccagccccaggggactggacgactgaatatgaacagcagtat
ctggggccgccaagttgggctgatcaattcgccaatgagaaacttgcacgtggaccagaa
cagtgggctgatgagtttgcttccgcgaaccgacagcaagaatcggctgaggaccaatgg
gttaatgagttttcgaagttgaatgttgatgactgggtagatgaatttgctgaagggccc
gcgggtgggagttcggctgatgcatgggcaaatgcttatgatgagtttctgacggagaga
aatgctgaaaaacaaaatagtggtgtctacgtcttctctgacatgaacccttatgtgggt
caccctgaacctatgaaagaagggcaggaattgtttcgcaaaggacttttgagtgaagca
gcgcttgccctagaagctgaggttatgaaaaatcctgagaatgccgaaggttggagatta
cttggagtcacacacgcagagaacgatgacgatcaacaggcaatagctgcaatgatgcgg
gcacaggaggctgatccctcaaatctagaggtgcttcttgcgcttggtgtgagtcatacc
aacgagttggagcaagcaactgctttgaagtacttatacggatggctgcggaatcacccc
aaatatggatcaatcgcgcctccagagcttgctgattccctataccatgctgatattgct
agattattcactgaagcttctcagatgaatcctgaagacgccgatgtgcatatagtgttg
ggcgttctcttcaatctgtcaagagaattcgatagagcaataacttccttccaaacagcg
ttacagttgaaaccaaacgactattctctttggaataagcttggagcaacacaagctaac
agtgtccagagtgctgatgccatatctgcttatcaacaggctctggatttaaaacctaat
tacgttcgtgcttgggcaaacatggggatcagttacgcaaaccaggggatgtacaaagaa
tcaatcccttattatgttcgtgcccttgcgatgaatcctaaagccgataacgcttggcaa
tacttgagactctcgttaagctgtgcgtcaagacatgaccttatcgaagcttgtgaggca
aggaatctggatctcttgcagaaagagttcccgctttga
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