Raphanus sativus (radish): 108847930
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Entry
108847930 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-12
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108847930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108847930
04131 Membrane trafficking [BR:
rsz04131
]
108847930
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108847930
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108847930
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108847930
mRNA cycle factors
P-body specific factors
108847930
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108847930
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108847930
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108847930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_22
nSTAND3
AAA_19
AAA_16
TSC22
CbiA
Motif
Other DBs
NCBI-GeneID:
108847930
NCBI-ProteinID:
XP_056856806
UniProt:
A0A9W3CZB2
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MGTPVNITLGSHVWVEDPELSWTNGEVTEIKGTNATILTSDGKTIVASISSLYPKDTEAP
PAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFQRLPHLYSVHMMEQY
KGAAFGELSPHLFAVADTSYRAMINEAKSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
DTEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGKISGAAIRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEEVKKFKLGDPRTFHYLNQTNCYEVSNVDDAREYL
ETRNAMDIVGIGQESQDAIFRVVAAILHLGNVNFIKGEDADSSKLKDDKSRYHLQTAAEL
LMCNEKMLEDSLCKRVIVTPDGNITKPLDPESAALNRDALAKTVYSRLFDWIVDKINSSI
GQDPNATSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKL
ARTAFTVNHYAGDVTYSAEFFLDKNKDYVVAEHQALLDASKCSFVANLFPPLPEDASKQS
KFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPSIFENDTVLNQLRCGGVLEAI
RISCAGYPTKRAFDEFLDRFVMLATDVPEGSDEKSACASICDKMGLKGYQIGKTKIFLRA
GQMAELDARRTEVLAAATRLIQRQIRTYLTRKEFLGQKKATIFVQKLLRAQLARKLYQNM
RREAASICIQKNTRAHRARMCYTKLQASATVIQTGLRAMDARNKHRHKRRTKAAIIVQRE
WRRYQAHEAYNQYKKSTLALQCLWRAKVARKELKKLKMAARETGALKEAKDKLEKRVEEL
TWRLELEKHQKVDLEEAKAQEIANLQNALTELQEKLDEAQTAIIQEKEAAKLAIEQAPPV
IKEVPVVDNTQLELLSSQNNELEVEVEKLKGKIEEFEAVCSALERDNKESIDDAEEAKSK
AIQLQEVIERLQTNQSNLESENQILRQQALTASTSAVEPEELNSLKERIAILESENETLR
RQTAVVEKIVANEAVSASAKDLENGHQTEVVQETKEPRTPVTVLATQRSLTDRQKESHDV
LLTCLTEERRFDNGRSVAAWIIYKTLLQWRSFELEKTNIFDRIVHKIRSSIEKSQDDTRE
LTYWLTTSSTLLYLLQSTLKFSNTNNSASRRNRSSQTTLFGRLVQGMQSSSLGLETSSGY
SGMVGISNDQAMVEAKYPALLFKQHLAXYVEKTYGMIRDSLKKEINPLLNLCIH
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggggactcctgtaaacatcacactcgggtcacatgtctgggtagaggatccagaactc
tcatggactaatggagaagtgacagagatcaaaggcactaatgcaacaatactcacttca
gatgggaaaacaattgttgctagtatctctagcctttatccaaaggatacagaggcacca
cctgcaggagttgatgacatgactaaactggcttacctccatgagccaggggtcctccac
aatcttgcttgccggttttctttaaacgagatatatacttacactggaaacatcttgatt
gctgtgaatccattccaaagacttccacatttgtacagcgtccatatgatggagcagtat
aaaggagctgcgttcggagagctaagcccacatctgtttgctgttgcagataccagttac
agggcgatgataaatgaggcaaagagccagtccattttggttagtggagagagtggagcc
gggaagacagagacaaccaaaatgcttatgagatatcttgcattcatgggaggcagatca
gatacagaagggagaagtgttgaacaacaagtcttagaatctaatccagtcttggaagcc
tttggaaacgccaaaactgtgaaaaacaacaactcaagtcggtttggaaagtttgttgag
atccaatttgacaagcgtgggaagatatccggagctgcaatccgaacttatcttctagaa
cggtcgcgtgtttgccaagtttcagaccctgagaggaactaccactgcttctacatgcta
tgtgcagcaccacctgaggaagtcaagaagttcaagctaggggatccaaggacgttccac
tatctgaatcagacaaactgctatgaggtttctaatgtagatgatgcaagagagtatcta
gagaccagaaatgccatggacattgttggtattggacaagagtcacaggatgccatattc
cgcgttgtagctgccatcctccaccttggaaatgtcaattttatcaaaggagaagacgca
gattcttcaaaactcaaggatgataaatcaagatatcatcttcagacagcagcagaacta
ctcatgtgcaatgagaagatgctggaggattcactctgcaagcgtgtaattgtaactcct
gatggtaacattacaaagccacttgatccagaatcagcagccttaaatcgtgatgcttta
gccaagacagtatactccaggctgtttgactggattgtggacaagatcaacagctcaata
ggtcaagatccgaatgctacaagcttgatcggagtcctcgatatttatggttttgaaagc
ttcaagatcaacagttttgagcagctatgcatcaatctcacaaatgagaagttgcaacaa
cacttcaatcagcatgtatttaagatggagcaagaggaatacacaagggaggaaatcgac
tggagctatgttgaatttgttgacaaccaagatgtattagatcttattgagaagaaacca
ggaggcataattgccttactcgatgaagcatgcatgtttcccaagtcgacccatgagacg
tttgcacagaagatgtatcaaacatataaaggacacaagcgtttcagcaaacctaagctt
gccagaacagccttcactgtcaaccactatgctggagatgttacatactcagcagagttt
tttctcgacaagaacaaggactatgttgtggcagaacatcaagctttgttagatgcatct
aagtgctcttttgtggccaatttgtttccaccattaccagaagacgcatcaaagcagtcc
aagttttcatcgattgggacacgtttcaagcaacaactccaagctctaatggagacgctt
aacacgacggagcctcattatattagatgtgtgaagccaaatacagttctaaagccatcg
atttttgagaatgacactgtcctaaaccaactaagatgtggaggtgtactggaagctata
agaatcagttgtgctggttatccaacaaaacgagcatttgatgagtttcttgatcgtttt
gtgatgctagcaacagatgtaccagaaggatctgatgaaaagtctgcatgtgcttcaatc
tgtgacaaaatgggattaaagggttaccagatagggaaaacaaagatatttcttagggct
ggacaaatggctgaactagatgcacgaagaaccgaggttttggctgctgccaccagactc
attcagaggcagatcaggacttatttgacaagaaaagagttccttgggcagaaaaaggct
acaatttttgtgcagaaacttttgagagcacaacttgcacgcaagttatatcaaaacatg
cgaagggaagctgcttcaatctgtattcaaaagaacactcgtgctcatagagcaaggatg
tgctacactaaactccaggcatcagcaacagttattcagactggtttacgagcaatggat
gctcgaaacaaacatagacacaaaagaagaaccaaggctgcaattattgttcagagagaa
tggagaagataccaagctcatgaagcttataaccagtacaaaaaatcaacgttagcatta
caatgtctgtggagagctaaagtagctcgaaaagagctcaaaaagctcaaaatggctgca
agagaaactggggcactcaaggaagccaaagacaagttagagaagcgtgtggaagagcta
acctggcgtcttgaattagagaaacatcaaaaggttgatcttgaagaagccaaagcacaa
gagattgcaaacctacaaaatgctttaactgaattgcaagagaagctagatgaagcccaa
actgcaatcatacaagagaaagaagcagcaaaactagccattgaacaagctccaccagtc
atcaaagaggttccagttgtagacaacactcaactggagttactgagcagtcaaaacaat
gagctggaggttgaggtagagaaattaaaaggaaaaattgaggagtttgaagcagtgtgt
tctgcacttgagagagataacaaggaaagtatagatgatgcagaagaggcaaaatcaaag
gccattcaacttcaagaggtcattgagagattacaaacgaaccagtcaaaccttgaatct
gaaaatcagatcttgcgccagcaggctttgactgcttcaacaagcgccgtagagcctgaa
gagttaaacagcctgaaggagaggattgcaattctagagtcagaaaatgaaactcttaga
agacagacagctgttgtagagaagatagtggctaatgaagcagtttctgcatctgcaaag
gatcttgaaaatggacatcagacagaagtggttcaggaaacaaaagaaccaagaactcca
gtcactgtgttagcaacacaaagatctttaacagataggcaaaaggagagccatgatgtg
ctgctgacatgcctcaccgaggagagaagatttgataatggcagatctgtggcagcctgg
ataatttacaagacactacttcaatggagatcatttgaactggagaaaacaaatatattt
gatagaattgttcacaaaatcagatcgtccattgagaagagccaagacgacacaagggaa
ctaacttattggctcacaacaagctctaccctcttatatcttctacaatctacactcaag
ttcagcaacacaaataactctgcttcaagacgtaacagatcatcccagactacactattt
ggtcgtctggtgcaagggatgcaatcatcttcattgggactggaaacatccagtggatac
agcgggatggttgggatatcaaatgaccaagccatggttgaagctaaatacccagcgtta
ctattcaagcaacacttagctngctacgttgagaaaacatatggaatgatccgagatagc
ttgaagaaagagattaacccgttactaaatctctgtatccat
DBGET
integrated database retrieval system
