Raphanus sativus (radish): 108848000
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Entry
108848000 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-10-like
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108848000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108848000
04131 Membrane trafficking [BR:
rsz04131
]
108848000
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108848000
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108848000
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108848000
mRNA cycle factors
P-body specific factors
108848000
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108848000
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108848000
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108848000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
108848000
NCBI-ProteinID:
XP_056860780
UniProt:
A0A9W3DAA0
LinkDB
All DBs
Position
3:18629743..18639625
Genome browser
AA seq
1769 aa
AA seq
DB search
MAALGSIVWVEDTDEAWIDGEVVEANDDDVKVICQTKTVTAKVNAVYPKDPEFPELGVDD
MTKLAYLHEPGVLLNLKARYNANEIYTYTGNILIAVNPFKRLPHLYGNDIMEQYKGSDFG
ELSPHPFAVADSAYRKMINEGVSQAILVSGESGAGKTESTKMLMQYLAFMGGKAQTEGRS
VEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFNHMGRISGAAIRTYLLERSRVCQ
VSDPERNYHCFYMLCAAPQQVIEQYKLGEPSTFHYLNQSNCYALSALDDAKEYLATRKAM
DVVGISSEEQDAIFRTVAAILHLGNIEFEKGEESDAAEPKDDKSRFHLKVAAELFMCDEK
ALEDSLCKRVMVTRGESITKSLDPGSAALSRDALAKIVYSKLFDWLVTKINNSIGQDPSS
EYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEF
IDNQDVLDLIEKKPGGIIALIDEACMFPKSTHDTLAQKLYQTFNGHKRFTKPKLARTDFT
ICHYAGDVTYQTELFLDKNKDYVVREHQALMNSSDCSFVSSLFPKLRLESSGSSKFSSIG
SQFKQQLQSLLETLNTTEPHYIRCVKPNNVLKPEIFENINVLHQLRCGGVLEAIRISCAG
YPTRKSFSEFLTRFRILFPEATNKSFDEVDACKKLLAKVELKGFQIGKTKVFLRAGQMAE
LDAHRSEVLGHSARIIQRKVLTYQSRKKYLVLQSASRDIQAFCRGYVARLQFESMRREAA
SIRIQKQARTYICHNAYKKLCISAVYVQTGLRAMAARVELQYRKKRKAAIVIQASFKTSF
XXQXSFILFXVSITCKLLIIPQSQIRRCLCRRRYLRMKKAAITTQCGWRVKVARRELRKL
KMAAKETGALQETNTKLEKELKELTSILELEKQMRMKLEETKNQEVAELQAALNDMKLQL
GETQETKSEEILKLQSALQDMQLEFEELAKELEMTHDIAAENENLKELVSSLQRKVDDPE
TKYEETGRLSEERIKGEVPVIDHDVIIKLEAENQQLKALVSSLEEKIDALDRKHDETSSN
ITEQLKESASSDYEIVSDLAAENERLKALVSSLEKKNNKKDGSDSSNEQKERTHMIKEES
STEDTDNEMTKKLAAENKELFDLVDLLEKKIVETEKKYEEASRLCEERLQQVVDTEKKHE
EASKLCEERLQQVVEAETKLIELKTFMQRLEEKVSDMETEDKILRQQALAHSASRKMSPQ
MSFTGGPPPMENGHHESLAPLPSRRFGTISFRRSRIERQPHEYVDVLIKFVSQKVGFSHG
KPVAAFTIYKCLIHWKVFEAEKTSIFDRMVPVFGSAIENPEDNDHLTYWLTNTSTLLFLL
QRSLKTHSTSSASPKLPPQPTSFFGRMTQGFRSTSSASLSGDVVQQVDAKVPALLFKQQL
TAYVETIYGIVQENVKRELEPVLSSCIQGLKDSSREQPEENISAESSEQNSPAKPSEQNS
PAKLSEQNSPEKPSEQNSPAKPSEQNSQEKLSSPEKPSEEDPHAKISEETPPAKPSSAEN
SQTETWQGIIDLLNRLLGTLQKNYVPLFLAQKIFSQTFQGINVQVFNSLTQQECCTFNMG
KKVNALLNELEAWCSLATEDFVGSSWDELKHTRQAVVILVTEQKSTITYDDLTTNLCPVL
STQQLYRICTLCKIDDDKDKKNVSPDVISNLKLLITDEDEDSRSFLLDNDSSIPFAADEI
SNCMQEKEFTNVKAAMELADNPNFQFLKD
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttggggtcgatcgtctgggtagaagacacagatgaagcctggattgatgga
gaagtagtcgaagctaacgatgatgatgtcaaagtcatctgccaaaccaagacggttacg
gcaaaggtaaatgctgtctatcccaaggaccctgagtttcctgaacttggtgtcgacgac
atgaccaagcttgcgtatctgcatgaaccaggggttcttctcaatctaaaggcccggtac
aatgctaatgaaatatatacatacacagggaatatactgatagctgtgaatccctttaaa
agattaccacacctatatggaaatgatataatggaacaatataaaggctctgactttggc
gagttaagcccacatccttttgcagttgctgactctgcatacagaaaaatgatcaacgag
ggagtaagccaggcgatcttagtgagtggagaaagcggtgctgggaagacagagagcaca
aagatgctcatgcagtatcttgcattcatgggtggaaaagctcaaactgaaggacgatct
gttgaacagcaagttttagagtctaatccagttttagaagcttttggtaatgcaaaaacc
gtcaaaaacaataattcaagtcgttttggtaagtttgtggagattcagttcaatcatatg
ggaagaatctctggagctgctattagaacatatctgcttgagaggtcgcgtgtttgtcaa
gtttctgatcctgaaagaaactaccattgcttttacatgctttgcgctgcgccacaacag
gtaattgagcagtataagttaggggaaccaagcacgtttcactacctaaatcaatcgaat
tgctacgcgctgagtgcacttgatgatgccaaggagtacctagctacgaggaaagctatg
gatgttgttgggattagttctgaagagcaggatgcaatcttccggacagttgctgctatc
cttcatctaggaaacattgagtttgaaaagggagaagaatcagacgctgcagaacctaag
gatgataaatcccggttccatctgaaagtggctgcagaacttttcatgtgtgatgaaaaa
gctctagaagactccttgtgcaaaagagtgatggtgactcgcggtgaaagcattacaaag
tcgcttgatcctggcagtgcagctctaagcagagatgctcttgccaagattgtctattct
aaattgtttgactggcttgtgactaagatcaataactccattggacaagacccaagttca
gaatacattattggagtcctggatatatatggattcgagagttttaagacaaacagcttt
gaacagttttgtataaacctgacaaacgagaagctgcaacagcatttcaaccagcatgtg
ttcaaaatggagcaagaagagtatactaaagaagaaattgactggagttacatagaattc
atcgataatcaggatgtccttgatcttatagaaaaaaaacctggtggcattattgcactt
attgatgaggcttgtatgtttccaaaatcaacacatgatacacttgcgcaaaagctatac
cagacatttaatggccacaagcgttttaccaaaccaaagttagctcgtacagactttacc
atatgccattatgctggtgatgtcacttatcagactgaactatttttggacaagaacaaa
gattacgttgttagagaacatcaagctctcatgaactcttcagattgttcctttgtctca
tctttgtttcctaaactgcgattggaatcctccggctcatcaaagttctcatcaataggc
tctcaattcaagcaacaactacaatctttgctcgagacgttgaacaccacagagccgcac
tacatacgctgtgttaaaccaaataacgttctcaagccagagatttttgagaacattaac
gttctgcatcaacttaggtgtgggggggtcttggaagccattaggattagctgtgctgga
tatcctactagaaagtctttcagtgaatttttaactaggttccgtattttgttcccggaa
gctacaaacaaaagctttgacgaagttgatgcttgcaaaaagctactagcaaaagtggag
ctaaaaggttttcagatagggaagacaaaggtgtttcttagggcaggtcagatggcagaa
ctggatgctcaccgatccgaagttcttggccattcagcgaggatcatacaaaggaaagtg
ctaacttatcagtctcgcaaaaaatatttggtgttgcagtcggcttcaagagatatccaa
gccttttgtagaggatacgtcgcacggcttcagttcgagtccatgagaagagaagctgct
tctataagaatacagaagcaggcgcggacttatatatgccacaatgcctataaaaagctg
tgtatttcagctgtctatgttcagactgggttgcgtgcaatggctgcccgagttgaactt
caatacagaaagaagagaaaagcggcaattgttatccaagcaagttttaaaacctcattt
tgatgacaataatctttcattctcttttgagtatcaataacgtgcaagttacttattatt
ccacagagtcaaatcagaagatgtttgtgtcgtcggcggtatttaagaatgaagaaagca
gcaattaccactcagtgtggctggagagtaaaagttgcacgccgagaattgcgaaagctt
aaaatggctgctaaggaaacaggagccctccaagaaactaatactaaattagagaaggaa
ttaaaagaactcacttcaatcttagagcttgagaaacagatgaggatgaagcttgaggaa
accaaaaatcaagaagtggcagagttgcaagcagctttgaatgatatgaaacttcagctc
ggggaaactcaagaaaccaaaagtgaggagatcttgaagttgcagtcagctttacaggac
atgcaattagaatttgaagaacttgctaaggaactggagatgacgcatgatattgccgca
gaaaatgaaaatctcaaggagttggtgagctcattacaaaggaaagttgatgatccagag
accaaatatgaggaaacaggtaggctaagtgaagagagaataaaaggggaggttcctgtc
attgaccatgatgtaatcatcaaacttgaagctgaaaatcaacaactgaaggcgttggtc
agttcactggaggagaaaatagatgccttagaccgaaaacacgacgaaacaagctcaaac
atcacagagcagttgaaggagagtgcttcatctgattatgaaattgtgagtgatcttgca
gctgagaatgaacgtctcaaggcactggtgagttcgttagagaagaaaaataacaaaaaa
gatgggagtgattcatcaaacgagcaaaaggagcgtacacacatgattaaagaagagagc
tcaacagaggatactgataatgaaatgaccaaaaaacttgctgctgaaaacaaagaatta
tttgatctggtggatttgttggaaaagaaaatagttgaaacagagaagaagtatgaggaa
gcaagtagactttgtgaagagaggcttcagcaggttgtagacacagagaagaagcatgaa
gaagcaagtaaactttgcgaagagaggcttcagcaggttgtagaggcagagacaaaacta
atcgaattaaaaacattcatgcagaggctggaggaaaaggtctctgacatggagacagaa
gacaagattcttcggcagcaagcactggctcattcagcttcccggaaaatgtcacctcag
atgtcatttacaggaggacccccgccaatggagaacggacatcatgaatcacttgctcct
ttaccatcaagaaggtttgggacaatatctttcaggcggtctcggattgaacgacaaccc
catgaatacgttgacgtgcttatcaagtttgtttcgcaaaaggtcggattcagccatgga
aagcctgttgcggcgtttacaatttacaaatgtctcatacactggaaagtattcgaagca
gagaagaccagtatctttgatcgtatggttcctgtttttggttccgctattgagaatccg
gaagataatgatcatttgacctattggctaaccaacacatctacgctactattcttgctt
caaagaagcttgaaaacccatagcacaagtagtgcaagtccgaagttacctcctcagccg
acttcattttttgggaggatgacacagggtttccgttcaacctcttccgcaagcctttca
ggtgacgtagtgcaacaggtagatgctaaagtacctgctttgctgttcaagcagcagctc
acagcctacgttgaaacgatatatggaatagtgcaagagaatgtgaagagagagttagag
ccagttctctcgtcatgcattcagggactgaaagattcatcacgtgagcaacctgaagag
aatatatcagccgagtcatctgaacagaactcaccagcaaagccatctgaacagaactca
ccagcaaagctatctgaacagaactcaccagaaaagccatctgaacagaactcaccagca
aagccatctgaacagaactcacaagaaaagcttagttcaccagaaaagccatctgaagag
gatccacatgcaaagatatctgaagagactccaccggcaaaaccatcatccgcagagaat
tcacaaacggaaacttggcaaggcatcatagatcttttgaatcggcttctcggcacactg
cagaaaaattacgttcctctgtttcttgctcagaagatattcagccaaacattccaaggc
atcaacgttcaagtctttaacagccttacacaacaagaatgctgtacattcaacatgggc
aaaaaggtgaatgctttgttaaatgaactagaggcatggtgtagcctggcaactgaagat
tttgtagggtcttcatgggatgaactcaaacacacaagacaagccgtggtgatcctggta
acagaacaaaagtccacaattacatatgatgatcttaccactaacctctgcccggttctt
agtactcagcaattgtatagaatatgtactctctgcaaaattgatgacgacaaggataag
aagaatgtatctccagacgtgatttccaacttgaaacttctaatcacagatgaagacgaa
gacagccgttcgttcttgttagacaatgattccagcatcccctttgcagccgatgaaatc
tccaactgtatgcaagaaaaagaatttaccaatgtaaaggcagcgatggaactcgctgac
aaccctaacttccagtttctaaaggactga
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integrated database retrieval system
