Raphanus sativus (radish): 108848051
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Entry
108848051 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108848051
04121 Ubiquitin system [BR:
rsz04121
]
108848051
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108848051
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108848051
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108848051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
zf-Nse
zf-RING_16
CxC4
HypA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108848051
NCBI-ProteinID:
XP_018476959
UniProt:
A0A6J0MXV0
LinkDB
All DBs
Position
3:complement(14479933..14481916)
Genome browser
AA seq
312 aa
AA seq
DB search
MSSVGNTHWCHRCERGVRLHGRETVCSYCGGGFVELLELPQASPFGMFRSHRDVAERDHQ
AFDLMDALSDFMRDRENRARGGIITPGLAPLLIFGGQVPYRLSGVEALFNGGSPGIGITR
GNTGDYFFGPGLEELFEQLSAGATTRRGPPPAPRTSIDALPTIKISQRHLRSSDSNCPVC
KDEFELGAEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSGRGSSSSSQNRTNTRNS
RSGGSSNSRESSNERRNPFSSFWPFRSSGSASNSAQNRGGTRNSDTTDENHNYHHQQQQQ
SHMGYRGWPFDY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgttggaaacacccactggtgtcatagatgcgagcgtggtgtccggctacac
ggacgagagactgtatgttcttattgtggaggagggtttgttgaactgcttgaactccct
caagccagcccgttcggtatgttcagatctcacagggacgttgcggaacgtgatcatcag
gctttcgatctcatggatgctctctccgactttatgagggaccgagaaaacagagcaaga
ggaggcatcatcactcctggtctggctcctctgttgatctttggtggtcaggttccttat
agactatccggagtcgaagccctcttcaacggcgggtcgcctggcattggcatcactcgt
gggaacaccggagactatttcttcggtcctggtcttgaagagctctttgagcagctttca
gctggagctactactcgcagaggtccaccacctgctccgagaacatcaatagatgcattg
ccgaccatcaagatctcgcagaggcatcttaggtcgtctgactcgaactgtcccgtgtgt
aaagacgaattcgaattgggagcagaagccaaacagatgccttgtaaccacatctatcat
tctgactgcattgtcccgtggctggttcagcacaactcgtgtcctgtctgtcgccaagag
ttgccatcaggtagaggatcttcgagtagtagtcaaaacagaaccaacacccgaaacagc
agaagtggtggtagtagtaacagtcgtgagagcagcaatgagagaaggaaccctttctct
tccttctggccatttcgttcgtctggttcagcttcaaactccgctcagaaccgtggaggc
acgagaaactcggacacaacggatgagaaccataactaccatcaccagcaacagcaacag
tcacatatgggttacagagggtggccttttgattactaa
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