Raphanus sativus (radish): 108848239
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Entry
108848239 CDS
T06014
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108848239
03036 Chromosome and associated proteins [BR:
rsz03036
]
108848239
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108848239
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108848239
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108848239
microRNA pathway
RISC loading complex
108848239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108848239
NCBI-ProteinID:
XP_018477050
UniProt:
A0A6J0MX56
LinkDB
All DBs
Position
4:complement(35369248..35374911)
Genome browser
AA seq
923 aa
AA seq
DB search
MDSTSGNGAEIESANGSGVVTDALPPPPPVIPPNVEPVKITTEVAEKKNVRVPMARDGFG
TKGQKIPLLTNHFGVKVANLQGYFYHYSVALFYDDGRPVEQKGVGRKILDKVHETYHTDL
DGKHFAYDGEKTLFTFGALPSNKMDFSVVLEEVSSARTNGNASPNGNEEPSDGGRKRLRR
PNRSKSFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLVRQS
FFHNDPTNCEQVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPLIDFVIANQGA
RDPFTVDWSKAKRTLKNLRIKVSPSNQEYRITGMSDKPCKEQTFEYRPRNAPKNENGESE
TIEITVYDYFLRERNMELQYSADLPCVNVGRPKRPTYIPLEHCTLIPLQRYTKALNTFQR
SALVEKSRQKPQERMNVLSKALKVSNYDSEPLLRSCGISISSNFTQVEGRVLQAPKLKMG
RGDELFPRNGRWNFNNKQFVEPTKIDKWAVANFSARCNVRQLVDDLIRIGGSKGIEIAAP
FDVFEEGHQFRRAPPLIRVEKMFEEIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLTE
YGIVTQCMAPVRQPNDQYLTNCLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDV
SHGSPGQSDVPSIAAVVSSRQWPLVSKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKEL
LVDFYTSSGKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDENWNPKFLLLVAQ
KNHHTKFFQTNSPDNVPPGTIIDSKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIHF
SPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGVTA
PGPISVAQLPKLKDNVANSMFFC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattctactagcggtaatggagctgagattgagtcagcaaatggtagcggtgtggtt
acggacgcactgccccctcctccaccggtcatacctcccaatgtggagcctgtgaagatc
acaaccgaagtggctgagaagaaaaacgtgagagtccctatggctcgtgatggctttgga
acaaagggtcaaaagattccacttttgactaaccatttcggtgtcaaagttgctaacctt
cagggatacttctaccactacagtgtggcgctcttctatgatgatggtcgtcctgttgag
cagaaaggggtcggaagaaaaatccttgacaaggttcatgagacttatcacacggacctc
gatgggaagcattttgcctacgatggagagaagactctcttcacttttggagctttgcct
agcaacaagatggacttttctgttgtccttgaggaagtgtcttcagctaggactaatgga
aatgcaagccccaatgggaatgaagagccaagtgacggtggcagaaaaagacttcgtcgg
cctaaccgttccaagagcttcagagtggagatctcctacgctgcaaagattcctctacag
gctctcgctaatgccatgcgtggtcaggaatccgagaattcacaggaggctataagggtc
ttggacatcatcttacgtcagcatgctgctagacaaggttgtctacttgtgagacagtca
tttttccacaatgacccgactaactgtgaacaagttggtggtaacatcttgggatgcaga
ggattccattcaagtttcaggacaacgcagggtggaatgtcacttaacatggatgttaca
accacgatgataatcaagcctggtccgcttattgatttcgttattgctaaccaaggtgca
agggatccgttcactgttgactggtctaaggctaaaaggacacttaagaacctgaggatt
aaagtcagcccctcaaaccaggagtacaggatcactggcatgagtgacaagccttgcaag
gaacagacgtttgagtacaggccaaggaacgcgcccaagaatgaaaatggagagtctgaa
actattgaaataacggtgtatgactacttcctgagagaaaggaacatggagttgcagtac
tctgcggatttgccttgcgtcaatgttgggaggccaaagcgacccacctatattcccctt
gagcactgcaccttgattcctcttcagaggtacacaaaggcgctgaacaccttccaaaga
tctgccctcgttgagaaatctagacagaagccccaagagaggatgaatgttctttcaaag
gctctgaaagtgagcaactatgacagtgaacctctcctgcgctcctgtggcatttctatc
agctccaactttactcaggttgagggtcgtgtgctgcaagctcctaagttgaaaatggga
cgtggggatgaactgtttccccgcaatggtcgctggaacttcaacaacaagcaatttgtt
gagccaaccaagattgacaaatgggccgttgcaaatttctctgctcgctgtaatgtgcgt
caactggttgatgatctgatccgaattggaggatccaaaggaattgaaattgctgctccc
tttgatgtgtttgaggagggtcatcagtttcgccgtgctcctcctcttattcgagttgag
aagatgtttgaagagatccagtctaaactccctggtgctccacagttccttctgtgtctg
ctccccgaaaggaagaactgcgacatttatgggccatggaagaagaagaacttaactgaa
tacggcatcgttactcagtgcatggctccggtgaggcaacctaatgatcagtatctaacg
aactgtcttctgaagatcaatgctaagcttggaggcctgaattccatgctgagtgttgag
cgcactcctgcttttactgtgatctcgaaggttccaaccatcatccttggtatggatgtc
tcacatggatctcctggacagtctgatgtcccgtccattgctgctgtggtgagttcaagg
cagtggcctctagtctcgaagtacagagcatctgttcgcacacagccttcaaaagctgag
atgattgagtcactggtcaagaagaatggaacagaagatgatggcataatcaaagagttg
cttgtagatttctacaccagctcgggtaagagaaagccagagcatatcatcatcttcagg
gatggcgttagtgaatctcagttcaaccaggttctgaacattgagctcgatcagatcatt
gaggcctgcaagcttctagatgagaactggaacccaaagttcctcttgttggttgctcaa
aagaatcaccacaccaagtttttccagacaaactctcctgacaacgttcctccagggaca
atcatcgacagcaaaatctgtcacccaaagaacaatgatttctacctctgtgcgcacgct
ggaatgattggaacaacacgtcctacgcattaccatgtcctgtatgatgagattcatttc
tcacctgatgagcttcaagagctcgtccactccctctcttacgtgtaccaaagaagcacg
accgccatctctgttgttgcaccgatatgctatgctcacttggcagctgctcagctagga
acgttcatgaagtttgaagatcagtcagagacgtcctcaagccatggtggcgtgacagct
ccaggaccaatctctgttgctcagctccctaaactcaaagacaacgtcgccaattccatg
ttcttctgttag
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