Raphanus sativus (radish): 108848301
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Entry
108848301 CDS
T06014
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor REI1 homolog 2
KO
K14816
pre-60S factor REI1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108848301
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108848301
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
zf-met
C2H2-zf_KIN17
zf-C2H2_4
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
108848301
NCBI-ProteinID:
XP_018477126
UniProt:
A0A6J0MZM5
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Position
4:34471568..34473445
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AA seq
412 aa
AA seq
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MSGLACNSCNKDFEDDSDQKLHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQAKVK
SNEAPLLYTCGVCNKSYRSSKAHEQHLKSKSHVLKVASSSNGEEDKAIIKQLPPPPPRRV
EKKVNPQLKGLIEEEESEESEDEWVEVDSDEDLEGEEEDMDEDEEDGSGEEDMDEDDEDN
EFELDPSCCLMCDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYVGLKVKRDFIC
LYCNELCHPFSSLEAVRKHMEAKSHCKVHYGDGGDEEDAELEEFYDYSSSYANEGSENQM
VVAGETVNTVELFGGSELVITKRGENKVTSRTLGSREFMRYYKQKPPPSSQKHVVNSLAM
RYKSMGLATVQSKEDIVRMKVMREMNKRGARSRVKLGMKSNVIRNLPNNVTY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttagcatgtaactcgtgtaacaaggacttcgaagacgactctgaccagaag
ctccactacaagtccgagtggcaccgttacaatctcaaacgcaagatcgctggtgttcct
ggagtgacagaagctttgtttgaagccagacaagctgctatcgctcaggcgaaggtcaaa
tcaaacgaagcacctctgctttacacctgtggagtctgtaataaatcttacaggagctcc
aaagctcacgagcagcatctcaagtcaaagagccacgttctcaaggtggcttcttcaagc
aacggagaggaggataaagccatcattaagcagcttcctcctcctcctcctcgccgtgtt
gagaagaaggtcaatcctcagctaaagggtttgatcgaggaagaagagagtgaagagagt
gaggatgagtgggttgaggttgattctgacgaggatttagagggtgaagaagaagatatg
gatgaggatgaggaggatgggtctggtgaagaagatatggatgaggatgatgaggataac
gagtttgagttggatccgagttgttgtttgatgtgtgataagaagcataagacgatagag
aagtgcatggttcatatgcataagttccatgggttcttcattcctgatatcgagtacctc
aaggatcctaaagggtttctaacctacgttggtctgaaggtgaagagggacttcatttgt
ctgtactgcaatgaactgtgccatcctttcagcagtttggaagctgttcggaagcatatg
gaagccaagagtcactgcaaagtgcattacggtgatggtggtgacgaagaagatgcagag
ctagaagagttctatgactacagcagcagttacgctaatgaaggcagcgagaaccagatg
gttgtagctggggaaacagtgaatacagtagagctttttggtgggtctgagcttgtgatt
accaagagaggggagaacaaagtaacgtccaggactcttgggtctcgagagttcatgcgt
tactacaagcagaagccacccccatcttctcagaaacacgtcgtcaactctctagccatg
aggtacaagagcatgggtttggcaacggtgcagtcgaaggaggatatagtgaggatgaag
gtgatgagagagatgaacaagagaggagctaggagtcgtgttaagctgggaatgaagagc
aacgttatcagaaacttgcccaacaacgtcacctactag
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