Raphanus sativus (radish): 108848534
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Entry
108848534 CDS
T06014
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108848534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108848534
Transporters [BR:
rsz02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108848534
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Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108848534
NCBI-ProteinID:
XP_018477426
UniProt:
A0A6J0N0E2
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Position
4:complement(41527672..41530748)
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AA seq
533 aa
AA seq
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MDVNNKDKEKKIEFTFEDDEDLEDTSKYENDSDNTDQSDLGDLPGNDDDNNDDTFISQVQ
WPQSFRETTDSYTIAASPIFGSLLSNPSFYTPSFYRQSKSNLDVESKTPLLPERNEESDK
ASVTQSVWSHKGSFAEELPIGGYGCSFTQTIFNAINVMAGVGLLSTPFTVKETGWASMVI
LLLFAIICCYTATLMKDCFESKTGIITYPDIGEAAFGKYGRIFICVILYTELYSYCVEFI
ILEGDNLTGLFPGTSIDWLGIRIDTKHLFGILTALIVLPTVWLKDLRIISYLSAGGVIAT
VLIAVCTFFLGTTGGIGFHHTGQAVKWNGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKF
NKAVITTFILCVLLYGGVAIMGYCMFGEATLSQITLNMPKGLFFSKVAQWTTVVSPFTKY
ALLMNPLARSIEELLPERMSESIWCFLLLRTALVASSVCSAFLIPFFGLVMALIGSLLSI
LVAIVMPALCFIRIMGNKATRTQMILSSIIVVIGLVSGTLGTYSSVAKIIRNY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaataacaaggataaggagaagaagatcgagtttacattcgaagacgatgag
gatcttgaagacaccagcaagtacgagaacgacagcgacaacactgatcaaagcgacctc
ggagatctccctggaaacgacgacgacaacaacgatgatactttcatctcccaggtccaa
tggcctcagagctttagggaaacgactgattcttataccattgctgcatcaccgatcttc
gggtctctcttgagcaatcccagtttctacactccgagtttctacagacagagcaaaagt
aatcttgatgtcgagtctaaaactcctttgcttcccgagagaaacgaagaatccgacaaa
gcctcagttacacaatcagtttggtcacataaaggctcatttgctgaagagttgcccatt
ggtggctatggctgcagcttcactcaaaccattttcaatgcgattaatgtaatggctgga
gtgggacttctgtcaacaccttttacagtgaaagaaactggttgggcaagtatggtgatt
cttctcttgtttgctattatatgttgttacactgcaactttgatgaaagattgtttcgag
agcaagaccggtattatcacttatcctgacattggagaagctgcttttggcaagtatggt
cgtatttttatctgtgtgatactgtacacagaactatattcatactgtgttgagttcatc
attttggaaggtgacaaccttactggtctcttccctggtacatccatcgattggcttggt
atccgcattgacaccaaacatctatttggaatcttgactgctctcatcgttcttccgact
gtttggttgaaagatcttcgcatcatatcctacctatcagctggtggagttattgcaact
gttttgatagcagtgtgcacgttcttcctcggtacaacgggcggtatagggtttcatcac
actggtcaggctgtgaaatggaacgggataccttttgccattggtatctatggattttgc
tattcaggtcactctgtgttcccaaatatctatcagtccatggctgataaaaccaagttc
aacaaagcagtgatcacaacgtttattttatgtgttttgctatatggaggagttgcaatc
atgggttattgcatgtttggtgaagccaccttgtctcagatcacactaaacatgccaaag
ggcttgtttttctccaaagtggctcagtggacaactgttgtgagtccgtttacaaaatac
gctctcttgatgaacccacttgcaaggagtatagaagagctattacctgaaagaatgtca
gagagcatatggtgctttcttcttcttagaacagcacttgttgcttcttctgtttgttct
gctttccttatcccattttttggtcttgtgatggctctgataggatctcttctcagtata
cttgtggctatagtaatgccagctctatgcttcataaggataatgggtaacaaagctaca
agaacacagatgattctcagttcaataatagtggtgattgggttggtgagtgggaccttg
gggacgtactcttcggttgcaaagatcattaggaattattaa
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