KEGG   Raphanus sativus (radish): 108848910
Entry
108848910         CDS       T06014                                 
Name
(RefSeq) novel plant SNARE 11
  KO
K08494  novel plant SNARE
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108848910
Membrane trafficking [BR:rsz04131]
 SNARE
  SNAP-25[N] (Qb)
   NPSN
    108848910
SSDB
Motif
Pfam: Sec20 V-SNARE_C Prominin V-SNARE NPV_P10 MCPsignal DUF948 Med11 DUF7310 DUF3535 Occludin_ELL DUF7605 Laminin_II DUF5740 YbjQ_1 Syntaxin_2 Vps53_N Endotoxin_N JAKMIP_CC3 TMPIT LRS4 STX6_10_61_N DUF3450 Peptidase_S46
Other DBs
NCBI-GeneID: 108848910
NCBI-ProteinID: XP_018477872
UniProt: A0A6J0MZH2
LinkDB
Position
4:39069040..39071233
AA seq 264 aa
MDPISAVSEELAEIEGQINDLFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIK
DFDREVKSLEGGNDATTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPA
EDNMEENVLLASNMTNQELVNKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTD
QMSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNN
KDIRDIPGLAPPAMMNRRLLWNHY
NT seq 795 nt   +upstreamnt  +downstreamnt
atggatccaatctctgcggttagcgaagagcttgctgagatcgaaggacaaatcaatgac
cttttccgtgctttatcaaatggattccagaagttggagaagatcaaagatgctaataga
cagagcaggcagctcgaagaactcaccgacaaaatgcgcgactgcaagagccttattaaa
gatttcgatagggaagtcaagagcctggaaggtggaaacgacgccaccactaaccggatg
ttgaatgatagacgtcaatctatggttaaggaactaaactcatatgttgctcttaagaag
aagtactcatcaaatctagccagcaataataagagagtagatcttttcgatggtcctgct
gaagacaacatggaagagaatgtcttacttgcttcaaatatgaccaatcaagaacttgtg
aataaaggcaactctatgatggatgacactgatcaagccattgaaagagggaaaaagatt
gttcaagagaccataaatgtgggaacagatacctcagcagctctcaaggctcagaccgac
caaatgagtagggttgtcaatgaactcgattctattcatttctcactcaagaaggcctcc
aagctggtcaaggaaatcggtaggcaggttgcaacggacaaatgtattatggcatttctt
ttccttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaac
aaagacatccgggacataccgggcctagctccaccagccatgatgaacagacgtttactc
tggaaccattactga

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