Raphanus sativus (radish): 108848911
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Entry
108848911 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108848911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108848911
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108848911
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108848911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-Di19
zf-C3HC4
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
108848911
NCBI-ProteinID:
XP_018477873
UniProt:
A0A6J0N1L8
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All DBs
Position
4:48511759..48514528
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AA seq
311 aa
AA seq
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MAPGGSALKEVLESNSTRMDYEVKTTKVEVNNSNNNKPTKSSSAGIAKHGMHSNNGVYEL
LECPVCTNLMYPPIHQCPNGHTLCSNCKARVQNTCPTCRYELGNIRCLALEKVAESLEVP
CRYQSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECSVTGDISTLVVHLKDDHKVDMH
DGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDEN
EAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELK
LRVTGRIWKEE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcacctggaggcagtgctttgaaggaagtccttgaatctaactcgacgagaatggat
tatgaggtcaaaactacgaaagtggaagttaacaatagcaataacaacaaacctacaaag
tcaagtagtgcaggaattgcaaaacatgggatgcattccaacaatggtgtctacgagctt
cttgaatgtcctgtgtgtacgaacttaatgtaccctccaattcatcagtgtccaaacggt
cacacgctatgctccaactgcaaagcgagagtgcagaacacgtgccccacgtgtcgctac
gagcttggcaacataagatgcttggcgctcgagaaagtcgccgagtccttggaagttccg
tgccggtaccaaagcttgggatgtcacgacattttcccttactacagcaagcttaagcac
gagcagcattgcaggtttaggccttacgcttgcccttatgctggctctgagtgttcggtt
acaggtgatatctccacgctggttgttcatcttaaagatgatcataaagtcgatatgcat
gacgggtgcactttcaaccaccgttatgtaaaatcaaatccacatgaagtcgaaaatgct
acatggatgcttacggtgttcaactgttttgggagacagttctgtttacactttgaggct
ttccagctagggatggcaccagtgtacatggcgtttcttcgtttcatgggagatgaaaac
gaggcgaagaagttcagttacagcctggaagtaggagctcatggacgtaaactaacatgg
caagggatccctagaagcatacgtgacagtcacaggaaagttcgagacagtcaagacggt
ctcatcatcccaagaaaccttgcactctacttctctggaggtgataggcaagaactcaag
ttgagggtaactggtcgaatctggaaagaagagtaa
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