KEGG   Raphanus sativus (radish): 108849016
Entry
108849016         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108849016 isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108849016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108849016
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108849016
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 108849016
NCBI-ProteinID: XP_018478009
UniProt: A0A6J0N0R2
LinkDB
Position
4:complement(30611850..30615730)
AA seq 473 aa
MGAYCNDDLNMPVYSAGAPTNELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELKQ
LGVTNMVYPGAVHSRFEHSLGVYWLAGETAQKLKTFQGMELDIDKHDLQTVRLAGLLHDI
GHGPFSHMFEREFLPKVMSGCEWSHELMSVKMIDHIVDTHNIDIDAQMLKRVKDMILAST
EFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYLVRDSRACGLGCNFQFQRLTETMRVMDN
EICYRAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANDYLGISTNIDDPA
EYWKLDDTILKTIEIAPDSELAEAKELILRVRRRQLYQFCNEYAVPKEKIEHFKAVTAQD
IVCSQKHTSLTLKEEDIAVTNVKIDLARGRENPLECIKFFKDYESEEKFVIPEERVSHLL
PTTFQDMIVRVYAKKPELVEAVSEAFENFQLRTYGIKAQVHETPEKKKRRVMY
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgacgacctaaacatgccggtttactccgccggcgctccgacg
aacgagctccgattcagcaagcacgtctacgacaacgttcatggcaacatctacctcgat
cctctttgcttgaaattcattgacacggagcagtttcagaggcttcgtgaactaaagcag
cttggagtgacaaacatggtatacccgggagctgtgcattctaggtttgagcattctcta
ggtgtgtattggcttgcaggcgaaactgcacagaagctaaaaacttttcagggaatggag
ctcgacattgacaaacatgatcttcagactgtgagacttgccggacttctccatgatatt
ggccatgggccttttagccatatgtttgagcgtgaattcctgccaaaggtcatgagtggc
tgtgagtggtctcatgagttaatgtcggtaaagatgattgaccatattgttgatacgcat
aacattgatattgatgctcaaatgctgaaaagagtgaaggatatgatcctagcgagtact
gaattttcgcagctgaaaagcaacgcggaaaaacgtttcttgtatgacattgttgcgaat
ggtcgaaatgggattgatgtggacaagtttgactaccttgttcgtgattctcgagcatgt
ggactgggatgcaactttcagtttcaaagactgacagagacgatgagagtcatggacaac
gaaatctgttatcgcgctaaggagtaccgtaatgttcacaagttatttgcaacacgagct
gatctctatcgaactgtctacacacatccgaaagtaaaggcaatagagcttatgatagta
gatgccatggtcaaagccaacgattatttggggatttctactaacattgacgacccggct
gaatactggaagttggacgatacaatcctcaaaaccattgaaatagctccagattcagaa
cttgcagaagctaaagaactgatcctccgtgttcggagaaggcagctgtaccaattctgt
aacgagtatgcggttcccaaggaaaaaattgaacatttcaaagctgtgactgctcaagat
atcgtctgttctcagaagcatacaagcctaactctaaaagaagaggatatcgctgttacc
aatgtgaagattgatttagctcgtggaagagaaaatcctcttgaatgcatcaagttcttc
aaggattacgagagtgaagagaagtttgtgattccagaggaacgagttagtcacttgtta
cctacaacgtttcaagacatgattgtgagagtatatgcaaagaaaccagaactggtggaa
gcagtttcggaagcatttgagaacttccagttgagaacgtatggaatcaaagctcaagtt
cacgaaacacctgagaagaagaaacgtcgggtcatgtactag

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