Raphanus sativus (radish): 108849304
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Entry
108849304 CDS
T06014
Name
(RefSeq) two-component response regulator ARR14-like isoform X2
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108849304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108849304
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108849304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
KaiA_N
DUF5106
Motif
Other DBs
NCBI-GeneID:
108849304
NCBI-ProteinID:
XP_018478355
UniProt:
A0A6J0N0Y6
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Position
4:complement(11674019..11683286)
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AA seq
503 aa
AA seq
DB search
MVEKWGGDENGGPDRDLLNSPNMFSGNFPEGLRVLLFGEDRQYLHILEKHLQEFGYVVTT
SHDEERAMYLLRNHWDKFDIAIMEAHTLEGKIFRLISENESEIDIPIIITSQDDSRESVT
KWMRNGACDYLIKPIRPEDLRLIYKYLIKKMKLRSVTVAEEAEEKAAGEKSSFVGDSTIR
SPNRRKRNMLQTEEEDPDHNRDSATKKRRVVWDDNLNGKFLEAVNYLSRNDVVPKKILER
MNVSGLTRENVASHLQKFRMGLKKKNDQNKSDDRSLITPQERGMSSGERSNELYRGRNVQ
FPTHHVNNIPQPSYFQQHNTSLNLMTQRVSPPGNHYDRLSVASSSRNLVTTHQIHTSHQQ
ISEFPCNDQNIEERLIFNEDEDDGVRNLITNWLTQNLEPINLFPLEESVIATTMRFNDIQ
VSGNQQQHVHAPSMVHIPLLPSSLSHNPFLDKKENIQLMDFNGQQLCPEQQQSNLANENR
FPETNPRRGSPRRDKMGQDRDQA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggttgagaaatggggtggtgacgaaaatggtggtccagatagggatctactaaactct
cccaatatgttttctggcaactttcccgagggtttgagggtgttattgtttggtgaagat
cgacaatatctccatatattggagaaacatctccaagagtttggctacgtagtgactaca
tcccacgacgaggaaagagctatgtatctactccgcaaccattgggataagttcgacatt
gctataatggaagcacacactttagaggggaaaatattccggttaatctcggaaaatgaa
tctgaaatagatattccaattattataacatcccaagacgattcaagagaatctgtgacc
aaatggatgaggaacggtgcatgtgactatctcataaaaccgataagaccagaagatcta
cgtttgatttacaaatacttgataaagaagatgaaactaaggagtgtcacggttgccgaa
gaggcagaagagaaagcagcaggtgagaagtcatcctttgtgggagattccaccataaga
agccctaacaggagaaaaagaaacatgttacaaaccgaggaggaggatccagatcataat
cgtgattccgccaccaagaaaaggcgagtggtgtgggatgataatcttaacggcaagttt
ttggaggcagtgaattaccttagcagaaatgatgttgtacccaagaaaattttagagagg
atgaatgttagtggcctcactcgagaaaacgtagccagccatctccagaaattccggatg
ggtctgaagaagaagaatgatcaaaacaaaagcgacgacagatcgttaataactccacaa
gaacgaggaatgtctagtggagaaagatcaaacgagctctacaggggaagaaatgtccag
tttccaacacatcatgttaacaacattcctcaaccgtcttattttcaacagcacaacaca
agccttaatctcatgacgcaacgcgtgtcacctcctggaaatcattatgatagactctct
gtcgcgtcatccagtagaaatctagtgacgactcaccaaattcacacttctcatcaacaa
atctcagagttcccatgcaatgatcagaacattgaagaaagattgatttttaacgaggac
gaggacgatggagttagaaacttgatcactaactggctcacgcaaaacttggaacctata
aatttgttccccttagaggagtcggtgatagcgactacaatgcgtttcaacgatattcag
gtgtcgggcaatcaacaacagcacgtgcatgcaccatccatggtgcacatacctttgctt
ccttcatctctctcacataatccctttcttgataagaaagaaaatatacaactgatggat
ttcaatggacaacaattatgccctgaacagcaacagtctaacctagcaaatgagaatagg
tttcctgaaactaatccaagacggggatctccaagaagggataagatgggtcaagatcgg
gaccaagcatga
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