Raphanus sativus (radish): 108849417
Help
Entry
108849417 CDS
T06014
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108849417
Transcription machinery [BR:
rsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108849417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
108849417
NCBI-ProteinID:
XP_018478471
UniProt:
A0A6J0N1A8
LinkDB
All DBs
Position
4:complement(9801803..9804375)
Genome browser
AA seq
513 aa
AA seq
DB search
MGVVFISSSAARSPLGLSSDYLLTQRSSLKKPSIVAFKADDSTNSPLIIPRVLDKQKEKR
VVATRRKPCKATKTTTKSPLDQNVAPSCPLDYNEAAARLENIYKLSPPPPATTLEEEEED
GTKVKVPRRRKRKDSGEENKKVVVRNNGEKEKRLTLDKRIALKRNNVQEKPVNAREKVTK
KQQEEEEKLERLVREYSASNDVVSLDWKKMKIPPVLTSTEHTWLFKLMQPMKALLQVKDE
LEKSMGREPREAEIAGEINMSVAEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFQDLTN
GPKFQDLCQAGMRGLITAIDRFEPKRKLRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLES
VRVEIYKAKMELLFELGRLPTEEEVVKRLKISPERYREVLRAAKPVFSLNSKHAVTQEEF
INGITDVDGVGADNRRQLALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGN
LNISREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagtgtttatttcaagctcagctgcgagatcacctctggggctaagcagtgat
tatcttctgacacaacggtcttcacttaaaaagccatccattgttgctttcaaagcagat
gattccaccaactcacctttgatcattcctcgagttttggacaagcagaaggagaagaga
gtagtggcaacgaggagaaagccctgtaaagccacgaaaacaacaacaaagtctccacta
gatcaaaacgtggctccttcgtgtccgttagactacaacgaagccgctgcgagactagaa
aacatttacaagctcagtcctcctcctcctgcaacaactctcgaggaagaagaagaagac
ggcaccaaagtgaaagttccacggaggaggaagaggaaagacagcggcgaggagaataag
aaagtagttgtgaggaacaatggggagaaggagaagcgtctgactcttgataaacggata
gcgttgaagagaaacaacgttcaagagaagccagttaacgctagggagaaagtgacaaag
aagcagcaagaggaggaggagaagctggagaggctggtgagagagtactcagcttctaat
gatgtagtcagcttggactggaaaaaaatgaagatacctcctgttcttacttccactgaa
cacacttggttgtttaagttgatgcaacctatgaaggctcttcttcaagtgaaagatgag
ttggagaagagcatgggaagagagccgagggaagctgagatagctggagagatcaatatg
agtgtggctgaagtgaaaaagaaaatcgaaattggtagagctgcaaggaacaaacttatt
aagcacaatctccgtcttgtattgtttgttatgaacaaatattttcaagatttaaccaac
ggaccgaagttccaagacctgtgtcaagccggtatgagagggctcatcacagcgattgac
cggtttgagcctaaaaggaagttacgtctctcaacttatggtttgttttggattagacat
gccatcatacgctccatgactacctctaacttcactcgtgtcccttttggacttgaatcg
gttagagtggagatctacaaagcaaagatggagctgttgtttgagcttggaagactccct
acagaggaagaggtagttaagagactcaagatctcacctgagagataccgtgaagtcttg
agagccgcgaaacctgttttctcactgaactcgaaacacgcggttactcaagaagagttc
atcaacggaatcactgatgttgatggtgtaggagctgataaccggagacagcttgctctt
ctcaggctagctctcgacgacgtgctggattcgttgaagccaaaagagagtctggttgtt
agacaaagatacggtcttgatgggaaaggggacaggacactaggagagatagctgggaat
ctcaacatctctagagaaatggtgaggaaacatgaagtcaaggctttgatgaagctcaaa
catcaggctcgagttgattaccttcggcagtacatcatctga
DBGET
integrated database retrieval system
