Raphanus sativus (radish): 108849512
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Entry
108849512 CDS
T06014
Name
(RefSeq) ABC transporter G family member 38
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108849512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108849512
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108849512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
PDR_assoc
AAA_21
AAA_29
RsgA_GTPase
AAA_25
AAA_16
AAA_33
AAA_18
AAA_23
AAA_22
AAA
Rad17
AAA_30
ABC2_membrane_3
ABC_trans_N
AAA_28
MMR_HSR1
AAA_17
nSTAND3
NACHT
PDR_CDR
NTPase_1
AAA_5
ORC-CDC6-like
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
108849512
NCBI-ProteinID:
XP_056864675
UniProt:
A0A9W3DLL5
LinkDB
All DBs
Position
4:12130553..12136725
Genome browser
AA seq
1401 aa
AA seq
DB search
MAHYRAGSEVENVLNDRNTSRREKEEDEDEAMKWAALERLPTYDRVRKAMLRGITGGFKE
IDIKDLSLVERKELFDRVVAMDDDDWHGFYLRRLKRRTDRVSLNLPTIEVRFENVNVTTE
ALEGSRAVPTVINSYVSIAKGVATKIGVLRSKKITVSILKDVSGIIKPGRLTLLLGPPGS
GKSTLLKALSGKTESGLKCTGKVTYNGHEMHEFVPERTAAYISQYDVHLPKLTVRETLKF
SAKCQGVGTGYDMLEELLRREKEFNIKPDPYLDALMKASVIKGHKENVVTDYVLKLLGLE
MCADTIVGDSMERGISGGQKKRVTTGEMLVGPVGAFFMDNISDGLDSSTTFQIVKCVKQM
IQVFDKTALVSLLQPPPETFELFDDVIILGEGRIIYQGPREDVLGFFESMGFRCPERKGV
ADYLQEILSRKDQEQYWANPDLPYRYVSAKKFEEGFRTYNLWSTISSQLATPFDREKNHR
AALTKTRYGARKMELLKACLVREQILMKRNIRIFGLKSFQLIFNAIMISIVFSTQREHHN
TIEDGIIYMGAIFLEIQMIVFSGFFELPMTIDKLPVFYKQRRFSFYPSWAFSLPASVINF
PISFVEVLIVVIITYYSIGYDPTITSVLKHYLILALCGQTSYGFFRCIAAVTRNHVVANT
IGCLVLMWLMTFSGYVLSRHQVHKWLTWAYWTSPVMYIQTAVSVNEFRSKSWKDGLGVAI
LKSRGFFVETYWYWIGLLALVTATILSNIVTSLCLAFLKQYGVSKSAVLRDECEDGTSNA
YSSVATKRTSNDKKLRIPFKPLYITFENIIYSVDTPNEMKKRGVKDDKLVLLNGLSGAFR
PGHLTALMGMSGAGKTTLMDVLAGRKNTGYITGDINISGFPKNQDSFARVSGYCEQFDIH
SPLLTVYESLLYSAWLRLPPNIDASTRELFIEEVMELIELEPLKDMLVGYVGISGLSTEQ
RKRMTIAVELVANPSILFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF
ESFDELFLLARGGEEIYVGPIGHNSSKLIEYFEGIRGVGKIKEGYNPATWALEVTTREQE
DVLGVRFAQEYKNSNLYKRNKDLIKELNNVPPHAQDIHFSTKYSQSYLTQFQACLWKLHK
SYWRNVPYNAVRLCFAAAVGILYGIIFWSLGQRMGTKEDIYNSVGAMSIVVGFLGSQSAA
TVRPVAIAERTVFYRETVAGMYSALPYAFSQMIIEIPYTMAQAWIYSIFVYGMIGYEWTA
SKFLLYTFFTFITILYYIYTGFMLIAVSPNQETAAILNGIISTTLNVFSGFTIPRPRMPV
WLRWFPYASPAWWGLYGLTISQYGDVETRLDTGETVKEFMKNYYGYEHDFLWVVSLVIIA
FCLLFAFIYALSVKTLNFQKR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcacattacagagccggctcagaggtagagaacgtattaaacgatagaaacactagt
cgccgggagaaggaggaagatgaagatgaagccatgaaatgggcggctctggagcgtctt
cctacgtacgaccgggttaggaaggccatgctaagagggatcacaggaggtttcaaggag
attgacattaaggatcttagcctcgtggagagaaaggagctatttgatagagtggttgca
atggacgacgatgattggcatggattctatctacgaaggctaaagagacgcaccgataga
gtctctttgaatctcccaacaatagaagtcagatttgagaatgtgaacgtgactaccgaa
gcacttgaagggagcagagctgttcccacagtcattaactcatacgttagcattgcaaaa
ggtgttgcaactaaaatcggagttcttcggagtaaaaaaataacagtctccattctaaaa
gatgttagcggaatcatcaagcctggcaggctaactctacttttaggaccaccgggctct
ggaaagtcgaccctactcaaagcattgtctggaaagacagaaagtggactaaaatgtaca
gggaaagtgacatacaatgggcatgaaatgcatgagtttgtacctgaaagaactgctgcc
tatatcagccaatacgatgttcatctgccaaagctaacagttcgagaaacactaaagttt
tccgcaaaatgtcaaggagtcggcacaggctacgatatgcttgaggagttactgagacgg
gagaaagaattcaatatcaagccagatccttacctagatgctctaatgaaggcttcagtt
ataaaaggacacaaggagaatgtggttacagattacgttttaaagcttctaggacttgag
atgtgtgctgatactattgttggggacagtatggaaagaggcatctctggtgggcaaaag
aaacgtgtaactaccggcgagatgttggtcggacctgtcggagctttcttcatggataac
atatcagatggtttagatagctcgacgacctttcagattgtcaaatgcgtcaagcaaatg
atccaagttttcgataaaaccgctcttgtctctcttctccagcctcctccagagacattc
gagctctttgatgatgttattattcttggagaaggccgtataatttaccaaggacctaga
gaagacgtcctcggcttctttgagtctatggggtttaggtgtcctgaaagaaaaggagtt
gctgattacttgcaagaaattttatcaagaaaagatcaagaacaatactgggctaatcca
gacctaccttatcgttatgtatcggcaaaaaagttcgaggaaggattcagaacgtacaat
ctatggagcacaatcagttctcagctagcaaccccatttgatcgagagaagaatcataga
gcagccttgacaaagactagatatggagctagaaagatggagctactaaaggcctgcttg
gtacgagaacagattctaatgaaaagaaacattagaatcttcggcctcaagtcatttcag
ctcatcttcaatgcaatcatgatatccattgtgttttcgacacaaagggaacaccacaac
acgatagaggatggtatcatctacatgggagctatctttttagaaatacaaatgattgtc
ttctctggcttctttgaacttcctatgacgattgataagcttcccgtgttctacaagcaa
cgtcgtttcagcttctatccatcgtgggctttctcgttacccgcctcggtcatcaacttt
cctatatcattcgtcgaagtcttgattgtggtcattataacttattacagcattggatat
gatccaaccatcacatcagttttaaaacattacttgattctagcattgtgtggacaaacg
tcgtatggattttttcggtgtatcgccgcagtgactaggaaccatgtggttgcaaacaca
atcggatgtcttgttttgatgtggctgatgacattcagtggatatgtcttgtctcgacac
caagtccacaaatggttgacatgggcgtattggacatccccggttatgtacattcagaca
gctgtttccgttaacgagttccgcagcaagtcatggaaagatggtcttggagtagcgatt
ttgaagtctcgaggattttttgtggagacttactggtactggattggacttttggcattg
gtcacagccacaattctctccaacattgttacatctttgtgtctggcttttcttaaacaa
tatggagtatccaagtctgcggttttacgggatgaatgtgaagacggtactagcaatgca
tattcaagtgtggcgacaaagagaacttccaacgacaagaaactgcgtatacccttcaag
cctttatacatcacgttcgagaacatcatatattctgttgatactccaaatgagatgaaa
aaaagaggggtaaaagatgataaactagtgctacttaatggactaagcggtgcttttagg
cccggtcatctcactgcactaatgggcatgagtggagcaggcaaaactactttgatggat
gttttagccgggcgcaagaacactggttacattacaggggacatcaatatctctggcttt
cctaaaaatcaggacagctttgctcgtgtttcagggtactgtgaacagtttgacatacat
tcccctctactaactgtctatgagtcccttctttattctgcatggttgaggttacctcct
aatatcgacgcaagtactcgagagcttttcattgaagaggtgatggagttgatagagtta
gaaccattgaaggatatgttagttggttatgttggaataagcggtctttcgactgagcaa
agaaagagaatgacaatcgctgtagagcttgtagccaatccatctattcttttcatggat
gagccaacatctggcttggatgcaagagctgctgccattgtcatgaggactgttagaaac
actgttgacactggaagaactgttgtgtgcaccattcatcaacctagtattgatatcttt
gaatcctttgatgagcttttcttattggctagaggtggagaagagatctatgttggtccg
ataggccacaattcctcaaaactaattgaatactttgagggaataagaggggtaggtaag
atcaaggaaggttataatccagcaacatgggcactggaagtaacaacaagggaacaagaa
gatgttcttggtgttagatttgctcaagaatacaaaaactcaaacctctacaagagaaac
aaagatctaattaaggaactaaacaatgttccacctcatgcacaagacattcatttctca
acaaagtactcacaatcctacctcacacagttccaagcttgcctgtggaagctacacaaa
tcatactggagaaacgttccttacaacgccgtgcgtctttgtttcgccgccgcggttgga
atcttgtatgggatcattttctggagccttggtcaaagaatgggaacaaaagaagatata
tacaacagcgtaggcgctatgtcaatcgttgttggcttcttaggctcacaaagtgcggcc
acggtgcgtcctgtggccatagctgagcgtactgtcttttaccgagagaccgtcgctgga
atgtactctgctctaccatatgcattctcacagatgatcattgagatcccatatacaatg
gcacaagcatggatctattcaatttttgtctatgggatgattggatatgaatggactgct
tccaagtttttgctatacacattctttactttcattaccatcctctactacatctacact
ggcttcatgctcattgcagtaagccctaatcaagaaacagctgcgatactcaatggtatc
atctccacaacgttgaacgtcttctcaggattcaccattcctcgtcctagaatgccagtg
tggttgagatggttcccttacgctagtccagcgtggtgggggttgtatggattgactata
tctcagtatggagatgtagagacgaggcttgatactggtgagacggtgaaagagttcatg
aaaaactattatggttatgaacatgacttcttgtgggttgtgtcacttgtcatcattgct
ttctgtttgctctttgcctttatctatgccctctcggttaagactctcaacttccaaaag
aggtga
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