Raphanus sativus (radish): 108849568
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Entry
108849568 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108849568
KO
K14016
ubiquitin fusion degradation protein 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108849568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108849568
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108849568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
TP0260_1st
CDC48_2
Motif
Other DBs
NCBI-GeneID:
108849568
NCBI-ProteinID:
XP_018478628
UniProt:
A0A6J0N3U3
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All DBs
Position
4:36439655..36441816
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AA seq
309 aa
AA seq
DB search
MEFNGDDESSFEQCYRCYPVTFIEKAHLDKGDKIIMPPSALNRLASLHIEYPMLFQLSNE
SVGKITHCGVLEFTADEGLVYFPYWMMQNMSLQEGDIVRIKNMSLVKGTYIKLQPHTQDF
LDITNPKAILETTLRSYSCLTTGDTIMVPYNNKQYFINVVEAKPSSAVSIIETDCEVDFA
PPLDYKEPEKPQKLTPLKKRTRQVEEEEPANKVPKFTPFTGSGKRLDGKTQTESTEQEEK
PTEKGKDDEKLSTITPPQKSGKLVFGSNSKQTSKANVKVDPKNVEQESSTKSDEAKFKVF
TGKKYSLKG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaatggagatgatgagtctagcttcgagcagtgttaccgttgttaccctgtc
acattcattgaaaaggcacatcttgacaagggggacaaaattataatgcctccttccgct
ctcaaccgtcttgcttctttgcatattgagtacccaatgctgtttcaactgagtaacgaa
tctgttggcaagatcacacattgcggtgtactcgagttcaccgcagacgaaggccttgtt
tactttccttattggatgatgcaaaacatgtctcttcaagaaggagacattgtgagaatc
aagaatatgagcttggtgaaagggacttacatcaagcttcagcctcacactcaagatttc
ttggacattaccaacccaaaagccatcttggagactacgcttaggagctactcttgctta
accactggcgacacaatcatggttccttataacaacaagcagtattttatcaatgtggtt
gaagcgaagccgtcatcagctgtgagtatcatagaaacggactgcgaggttgattttgct
cctcctcttgattacaaagaacctgagaagccgcagaagctgactcctctgaagaagcga
actcgccaagttgaggaagaagaaccagcaaacaaagttcccaagttcacgccattcact
gggtccggaaagcgtttggatgggaagacacaaacagaatcaactgaacaagaagagaag
ccaactgagaaaggaaaggatgatgagaagctgtcgaccataacgccaccgcaaaaatca
gggaagcttgtctttggctcaaacagcaaacaaacttcaaaagcaaatgtgaaagttgat
ccaaagaacgtggagcaagaaagttcgacgaagtctgatgaagctaagtttaaggtgttt
actgggaagaaatactcactcaaaggttaa
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