Raphanus sativus (radish): 108849587
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Entry
108849587 CDS
T06014
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108849587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108849587
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
108849587
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108849587
Prokaryotic type
108849587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
ISET-FN3_linker
DUF3678
Whib
Motif
Other DBs
NCBI-GeneID:
108849587
NCBI-ProteinID:
XP_018478651
UniProt:
A0A6J0N3M4
LinkDB
All DBs
Position
4:complement(43778046..43780438)
Genome browser
AA seq
498 aa
AA seq
DB search
MRIEWGKAHLHFRVRLINPTFERSTVASKRQNPKTIQNFHCKASSFESKKMSHSSATGRR
KCRQKKEEEEEEPLGGGGDMEDLFSEKETQNIRMSLLDWYDENQRDLPWRKTRSSETEKE
TRAYEVWVSEIMLQQTRVQTVMEYYKRWMHKWPTIYDLTQASLEEVNEMWAGLGYYRRAR
FLLEGAKMVVAEKEGFPNKASSLMKVKGIGEYTAGAIASIAFNEAVPVVDGNVIRVLARL
KAISANPKDRLTVKNFWKLAAQLVDPSRPGDFNQSLMELGATLCSVTKPSCSSCPISSQC
RAYSLFQENRTLPVTEYPTKVVKSKPRLDFCCVCVLEILRHENNQSGGRFVLIKRPEEGL
LAGLWEFPSVILDKEASLAARRKAINLYLKEAFHLEPKETCTIVSRKELGEFVHVFTHIR
RKIYVELLVVQLTEGGTIDLFKDEGKDTLTWKCVDNDVLSSMGLTSAVRKVYSMVEAHKQ
DLSVLSNRTTISRKRRIT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgaatggggaaaagcacatctgcattttcgcgtgcggctaataaaccctaca
tttgaaagatcaacggtcgcttcaaagagacaaaacccaaagacgattcagaatttccac
tgcaaagcttcgagcttcgagagcaaaaagatgtcccattcttctgcgactgggaggaga
aagtgtcggcagaaaaaagaagaagaagaagaagaacccctcggaggaggaggagatatg
gaggatctcttcagcgaaaaggagacacagaacatcagaatgtctctgcttgattggtac
gatgaaaatcagcgagatcttccatggaggaagacaaggagcagcgagactgaaaaggag
acaagagcttatgaggtttgggtatcggagattatgttgcagcaaactagggttcagact
gtaatggagtattacaaacgttggatgcataaatggcccaccatctacgaccttactcaa
gcttctcttgaggaggtaaacgaaatgtgggcaggtttggggtactatcgacgggcacgg
tttcttttagagggagcaaagatggttgttgcagagaaagagggttttcctaataaagca
tctagcttgatgaaagtgaaaggaataggagaatacacagccggagcaattgcctccatt
gcttttaatgaggcggtacctgttgttgatggtaacgtgataagagtgcttgccaggcta
aaggctatctcagctaatccgaaagaccggcttactgtcaagaatttctggaaactagct
gcacaacttgtggatccttcacgtcctggagatttcaaccaatctctgatggagcttggt
gcgactctatgctccgtaacaaagccaagttgctcttcttgtcctatttccagccagtgc
cgtgcatattcactttttcaggaaaacagaacccttcctgtgactgagtatcctacaaaa
gtggtcaagtccaagccaaggctcgacttctgttgcgtatgtgttttggaaatactgaga
catgagaacaaccagtcaggaggtagatttgttcttataaagagacccgaagagggtctt
cttgctggtctttgggagttcccatctgttatattggataaggaagctagtttggcagca
aggaggaaggctatcaatctctaccttaaagaagcatttcatttagaacccaaggaaaca
tgcactatagtttcaagaaaagaacttggagaatttgtccacgtcttcacacacatacgt
cgaaaaatttatgtggagctattagtagtacaacttacagaagggggaacaattgatctg
ttcaaagatgagggaaaggacactctgacatggaagtgtgtggacaatgatgttctttct
tccatgggactgacatcggctgtaagaaaggtgtattcaatggttgaagcacacaagcaa
gatttatctgtattatcaaatagaacaaccatttccaggaaacgaagaatcacatga
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