Raphanus sativus (radish): 108849597
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Entry
108849597 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108849597 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108849597
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108849597
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108849597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
PcfK
BING4CT
Motif
Other DBs
NCBI-GeneID:
108849597
NCBI-ProteinID:
XP_018478668
UniProt:
A0A6J0N3Y1
LinkDB
All DBs
Position
4:complement(1665438..1667115)
Genome browser
AA seq
208 aa
AA seq
DB search
MDVTTTAEVIFDRNEAVETPPEDDCCPICFSSFTVPCRGNCGHWYCGSCILQYWNYAAVS
KPCKCPMCVRHITTLSPEASLQQRQEQEVKEVLAKIRRYNRLFVGGLTGFLQKLQELPLL
IKRLVWHMMDPDTNTLYFHEVRIFAMLMSTLYTAAEFSFIPTGGFRIVTVFDYTAIAMIL
ILRVVGLYRRRRLAQRVRHIAATEFEPE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaacaacaaccgccgaggtgatttttgatcggaacgaagcggtggagacgcct
ccagaggatgattgttgcccgatctgttttagctccttcacggtcccctgtcgaggcaac
tgtggccattggtattgcggaagctgtatattgcagtattggaactatgctgcagtctct
aagccttgcaagtgtcctatgtgtgttcgacacatcaccacgctgtcaccggaagcatcc
ttgcaacagcggcaagagcaagaggtgaaggaggttcttgctaagatccgtaggtataac
cgtctctttgttggaggtttaactggctttcttcagaagttgcaggagctgcctttgctg
ataaagagattggtgtggcacatgatggatccagatacaaacactttgtattttcatgaa
gttcgcatctttgcaatgttgatgagtaccctttacactgcggcagagtttagcttcatc
ccaacgggagggttcagaatagtgacggtgttcgactacactgctattgcaatgatcttg
attctgcgcgtggtggggttatatcggaggagacgtcttgctcagcgtgttaggcatatt
gcagctacagaatttgaaccagaatag
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