Raphanus sativus (radish): 108849715
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Entry
108849715 CDS
T06014
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108849715
Transfer RNA biogenesis [BR:
rsz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
108849715
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
RepC
UDPG_MGDP_dh_N
KR
Motif
Other DBs
NCBI-GeneID:
108849715
NCBI-ProteinID:
XP_056863164
UniProt:
A0A9W3DH81
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Position
4:28739377..28742027
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AA seq
475 aa
AA seq
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MMASAYYVTVGRGLKTSTFEKLKYLSLVGAGALIGSVSTVALLKLLSRSSVKQQHDEIPL
TKLLENGFESEKTQVTAAIGHEDLLADEIVSEHLTRNIQFFDLEAQRKVTGSYVVVIGLG
GVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAVCLKKHFSSIFPE
CHVEAKVLLYDSSSEEEILSGNPDFVLDCIDNIDTKVGLLAACVKRGLKVLSATGAGARA
DPTRIRVADLKESTIDPLSRSVRHRLRREHGIEGGIPVVFSLEKPKAKLLPFKGPNGEDE
NPSDYQVVPGFRVRIIPVLGTIPAIFGQIMASYVITQLAGLQVQMEPIVNLDLDHYRMLH
QRLIEHEEAVYGTSAQVQVDVEEVKYIVKELWHGRSARDEAAKDVGRGMWRAMNELMLVR
WDAKKPASVSNLILLKFKEADEHEAKTLEEVKETEAEFFEKVSCVLKKAELDFYG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtctgcatattacgtgacggtcggcagaggtttaaaaacatcaacttttgaa
aaactaaagtatctgagtctggtcggagccggagctctaatcggatccgtctccaccgtc
gccctccttaaacttctctccaggagctcagtgaagcagcagcatgatgaaatcccacta
actaaactgttagaaaatggttttgaatctgaaaaaacacaagttactgcagcaattggt
catgaggatcttttggcagatgaaattgtttctgaacatttaaccaggaatatccagttt
ttcgatcttgaagctcagcgtaaagtaactggatcatatgttgtggtcattggacttgga
ggtgtagggagccatgctgcctctatgctcttgaggtctggtgttgggaagctcctcctc
gttgactttgatcaggtgtcactttcatcattaaaccgacacgctgttgcaacacgagca
gatgtcggtatcccgaaagctgtttgtctcaagaagcatttctcttcgatctttcccgaa
tgccatgttgaagccaaggtgttgctgtacgactcatcctccgaggaagagattctttca
ggaaacccagatttcgttttggactgcattgacaacatcgacacaaaggtggggcttttg
gctgcttgcgttaagaggggtttgaaagttctgtctgcaaccggtgcgggtgctagagct
gatccaacaagaatcagagtggctgatttaaaagaatcgactattgaccctttatctcga
tctgtaagacatagattgaggagagaacacggcattgaaggaggcattcccgtcgtgttt
tccctcgaaaaaccaaaggcgaagctgcttccctttaaagggccaaacggggaagacgag
aatccttcagattatcaagtagttcctggctttcgtgttcggataattcctgttctagga
accatcccggctatctttggacagatcatggcctcctatgttataacacaacttgctggt
ttgcaagttcagatggagcctatagtgaatcttgatttggatcattaccgaatgcttcat
caacgccttattgagcatgaggaagctgtttatggaacatctgctcaagtccaggtagat
gttgaggaagtgaaatacatagtgaaagagttgtggcatggacgaagtgctagagacgag
gctgcaaaagatgtgggtagaggaatgtggcgagccatgaatgagctgatgctcgtaaga
tgggatgcaaagaagccagcatcagtctcaaacttgattcttttgaagtttaaagaggcg
gatgaacatgaggctaagactcttgaggaagtgaaggaaacagaagcagagttctttgaa
aaagtttcgtgcgtgctgaagaaggcagagcttgatttctatggctag
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