Raphanus sativus (radish): 108849781
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Entry
108849781 CDS
T06014
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108849781
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108849781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_8
Motif
Other DBs
NCBI-GeneID:
108849781
NCBI-ProteinID:
XP_018478887
UniProt:
A0A6J0N2K6
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All DBs
Position
4:10992640..10996272
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AA seq
642 aa
AA seq
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MSQSVISALSEDLLVRVYGFLDPPCRKTWRLVSREFHRVDSLSLTSIRILRVEFLHALLF
NYPNLSSLDLSVCPRLDDDAVSRLALEGAVSTSSRLKSLNLSRATAVRARGLETLARLCR
ALDRVDVSHCWTFGDREAAALSVAAGLRELKMDKCLSLSDVGLARIVVGCSGLEKISLKW
CMEISDLGIDLLCKKCKDLRSLDVSYLKITNDSVRSIALLPKLQVLDMVSCPLVDDVGLQ
YLENGSPSLQEIDVTRCDRVTFSSLVSILKGHPDLQQLKASHCISEISVSFLQSIKALKH
LKTLWIDGARVSDSSLLTLTSSCRALTELGVSKCVGVTDIGMMMGLARNCSNLKALNLAC
CGFVTDAAISAVAQSCLNLESLQLESCHLITEKGLQSLGCYSKRLQELDLTDCDGVNDRG
LEYISKCSNLLRLKLGLCANISDKGVFHIGSKCSKLLELDLYRCTGFGDDGLAAISRGCK
SLNRLILSYCGELTDTGVEKIRQLEDLSHLELRGIKNITGTGLAAIARGCKKLGYLDLKL
CENIDDSGFWALAYFSRNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLNRVTVEGF
EFALRACCNRLKKLKLLAPLRFLLSSELLEVLHARGCRIRWD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtctgttatatccgctctgtcggaagatctccttgtccgcgtctacgggttt
ctggaccctccctgtcggaaaacatggcgtctcgtcagcagagagttccaccgagtcgac
tcgctgagcctcacctcgatccgaatcctccgcgtcgagttcctccacgcgcttctcttc
aactaccccaacctctcctccttggacctctccgtatgcccaagactcgacgacgacgcc
gtttcgcgtttggccctcgaaggcgccgtttcgacgtcgtcgcgtctcaaatcactcaac
ctgagccgcgccaccgcggtccgagccagggggctggagacgctggctcgtctgtgccgg
gccctggatcgagtcgacgtgtcgcactgctggacgttcggcgacagggaggcggcggct
ctgtccgtcgcggcgggactcagggagctgaagatggacaaatgcttgagcctgagcgac
gtcggattggcgaggatcgtcgtcgggtgcagtggtctggagaagattagcttgaagtgg
tgtatggagatctctgatctcgggatcgatcttctctgtaagaaatgtaaagacttgaga
tctctcgatgtctcctatctcaagatcacgaacgattcagtccgctctatagctttactg
ccaaagctccaagttttagatatggtaagctgcccgttggtagatgatgttgggttacag
tatcttgagaacggttctccttcattacaggagattgatgtcacaaggtgtgatcgtgtg
acattttccagcttggtctccatactcaaaggccatcctgatcttcaacaacttaaagct
agtcactgtatatctgaaatatctgtgagcttcttacagagcatcaaagctttgaagcat
ctcaagactctgtggatcgatggagctcgcgtctccgattcctctcttttaaccttaacc
tctagctgtagagccttaacggaactcggagtgagcaaatgtgtaggtgtgactgacatt
gggatgatgatgggacttgcacgcaactgctccaacctgaaagctcttaacctcgcgtgc
tgtggatttgtgacggatgcagctatctctgctgtagctcagtcttgtctgaacctggag
agtttacagttagagtcttgtcatttgataaccgaaaaaggtcttcaatcgcttggatgt
tactccaagcgtctccaagaactcgatcttactgactgtgatggcgttaatgatagaggg
cttgagtatatctcaaaatgttctaatcttctaagattgaaacttggcctctgcgcaaat
atctcagacaagggagtgtttcatatcggctccaaatgttcaaagcttctagaacttgat
ctttaccgctgtactggttttggagatgacggtttagcagctatatcaagaggttgcaag
agcttgaaccggctcattctatcgtactgtggtgaacttacagacacaggggttgaaaaa
atccgtcagctagaagatttgagccaccttgaacttcgagggataaagaatataactggt
actggtctagctgcaattgcgcgcggctgcaagaaactaggttacttggacctcaaacta
tgtgagaatatcgatgactcaggcttctgggcgcttgcgtacttctcaagaaacctaaga
cagataaacttgtgcaactgctccgtttctgatacggctctatgcatgttgatgagcaat
ctgagtcgggttcaagacgttgacttagtccacctgaaccgtgtgactgtggaagggttt
gagtttgctctgagagcgtgctgcaacaggctcaagaagcttaaacttctcgcacctctc
agattcttgctctcatctgaattgctcgaggtgcttcacgctcgtggttgccgaattaga
tgggactga
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